The gene/protein map for NC_009784 is currently unavailable.
Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

Click here to switch to the map view.

The map label for this gene is 156977653

Identifier: 156977653

GI number: 156977653

Start: 1595505

End: 1597037

Strand: Reverse

Name: 156977653

Synonym: VIBHAR_06441

Alternate gene names: NA

Gene position: 1597037-1595505 (Counterclockwise)

Preceding gene: 156977654

Following gene: 156977646

Centisome position: 72.46

GC content: 48.53

Gene sequence:

>1533_bases
ATGAAAAAAACGCCAGTTATCAACCCAGAAAGCCAAGATGTTGCCGAGCTACAAGCGATGGTGAAAGCGCTGATGGTGTC
AGAAAGCCAATGGAAACAAGAGCGTCAATCTCTGCTTGAGCAACTCAAACTTGCTTTCGACCGTCAGTTCGCAAAACGCT
CGGAGGCGTTAAAGCCTTACGATGAATCTCAAGGTGACCTCTTCAACGAAGTGGAATGTGAAGCCGCTAAGGAAGAAGAG
GTTGAAGTGGTCACGACGACCACTACAACGAAGAAGCGTGGTAAACGCAAGCCCCTTCCAAAGACTTTGCCTCGTGAGGT
TATCGAACTCGATTTAGACGACCATGAAAAACAGTGTGCCTGCTGCCAACATAGTCTGCATAAAATCGGTGAAGACCGTA
GTGAGAAACTTGAGTTCTCACCAGCAGTGCTCAAAGTGCTGGAATATGTTCGTCCTAAGTATGCTTGTCGTCAGTGCGAG
CAAACTGAAGACAACAGCCACATCGTTCAAAAGCCAGCGCCTCAGAGCATCATCCCTAAAAGCTTCGCGACAGAAAGCTT
GCTGGCCAATATCATCCTTGGTAAATATCAATACGCAATGCCCCTTTACCGCCAAGAGTCGCTGTTTACTCAGTCGGGTA
TTGAGCTATCGCGAACTACCATGGCAAGGTGGGTTATCCAAGTCAGTGAGAAGTTCAAACCCCTCTATGCCGCCTTAAAA
GAGCATCTACTTCAACAAGTGGTGGTTCAGGCGGATGAAACGCCGCTCAATGTCCTTAAAGAAGATAAAAAGTGTTATAT
GTGGCTCTACTGCTCGGGCGCAGACTCGCCCGACGCTGCACTGCCGAATGTAAAGAATATCGCCTTGTACGACTATCAAA
ACAGTCGCGCGAGGGCATGCCCTGTTGCCTTCTTGGGGGATTACAGTGGTTATCTGCAAACCGATGGCTATGGTGCCTAT
GATGGTCTTCATCACGTAACCAATGTGGGTTGCTTGGCGCATGCACGGCGTAAGTTCATGGATGCTAAGAAGCTTCAAGG
TAAAGGTAAGTCAGGCAAAGCAGATAAAGCGCTGGCCAAAATCCAGAAGCTCTATGGGATAGAATCGTGCTTAAAAGGTG
CGACTGTCGAAACACGAAAAGCAGAACGTCAACTGCATGCCAAGCCGATACTGGATGAGCTGCACGACTGGATGACGTCT
CAACAAGTGCTAGCGTCTAGCTCGTTGGGCAAGGCGATAAAATACACGCTCGGCCAATGGCCCAAGCTCATCCGCTATAT
CGATGATGGTCATTTATCTATCGATAATAATCGTGCTGAACGCGCCATTAAACCGCTGGTCATTGGCAGAAAAAATTGGC
TGTTCTCAAACACACCAAATGGTGCTGATGCGAGCGCGATGCTTTACAGCATCGTCGAGACGGCGAAAGCCAACGGCCTT
ATCCTCTACGACTACATGGTCAAGTGCATGAAAGAGCTCGCGAAAGCGGAGCCTGATATCGATGCGCTCCTACCTTGGAA
CTTCAAATATTAA

Upstream 100 bases:

>100_bases
GCCATAAACCCGTTAAAATAAACGATTTTACAATGACTTAATTGATAATAAAGCCTTATCTACCAAGCGTGAATGGCATG
ATTTTAGTATAATAAATGCC

Downstream 100 bases:

>100_bases
CAACATCGCCCCGTGGGTTCATGGGGCGTTTACGGTGTAAGCAACTTTGCTGTTCGTTGTTATGGGTGCGCACCAATGAA
GCGGCTAATCAAAGCAAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 510; Mature: 510

Protein sequence:

>510_residues
MKKTPVINPESQDVAELQAMVKALMVSESQWKQERQSLLEQLKLAFDRQFAKRSEALKPYDESQGDLFNEVECEAAKEEE
VEVVTTTTTTKKRGKRKPLPKTLPREVIELDLDDHEKQCACCQHSLHKIGEDRSEKLEFSPAVLKVLEYVRPKYACRQCE
QTEDNSHIVQKPAPQSIIPKSFATESLLANIILGKYQYAMPLYRQESLFTQSGIELSRTTMARWVIQVSEKFKPLYAALK
EHLLQQVVVQADETPLNVLKEDKKCYMWLYCSGADSPDAALPNVKNIALYDYQNSRARACPVAFLGDYSGYLQTDGYGAY
DGLHHVTNVGCLAHARRKFMDAKKLQGKGKSGKADKALAKIQKLYGIESCLKGATVETRKAERQLHAKPILDELHDWMTS
QQVLASSSLGKAIKYTLGQWPKLIRYIDDGHLSIDNNRAERAIKPLVIGRKNWLFSNTPNGADASAMLYSIVETAKANGL
ILYDYMVKCMKELAKAEPDIDALLPWNFKY

Sequences:

>Translated_510_residues
MKKTPVINPESQDVAELQAMVKALMVSESQWKQERQSLLEQLKLAFDRQFAKRSEALKPYDESQGDLFNEVECEAAKEEE
VEVVTTTTTTKKRGKRKPLPKTLPREVIELDLDDHEKQCACCQHSLHKIGEDRSEKLEFSPAVLKVLEYVRPKYACRQCE
QTEDNSHIVQKPAPQSIIPKSFATESLLANIILGKYQYAMPLYRQESLFTQSGIELSRTTMARWVIQVSEKFKPLYAALK
EHLLQQVVVQADETPLNVLKEDKKCYMWLYCSGADSPDAALPNVKNIALYDYQNSRARACPVAFLGDYSGYLQTDGYGAY
DGLHHVTNVGCLAHARRKFMDAKKLQGKGKSGKADKALAKIQKLYGIESCLKGATVETRKAERQLHAKPILDELHDWMTS
QQVLASSSLGKAIKYTLGQWPKLIRYIDDGHLSIDNNRAERAIKPLVIGRKNWLFSNTPNGADASAMLYSIVETAKANGL
ILYDYMVKCMKELAKAEPDIDALLPWNFKY
>Mature_510_residues
MKKTPVINPESQDVAELQAMVKALMVSESQWKQERQSLLEQLKLAFDRQFAKRSEALKPYDESQGDLFNEVECEAAKEEE
VEVVTTTTTTKKRGKRKPLPKTLPREVIELDLDDHEKQCACCQHSLHKIGEDRSEKLEFSPAVLKVLEYVRPKYACRQCE
QTEDNSHIVQKPAPQSIIPKSFATESLLANIILGKYQYAMPLYRQESLFTQSGIELSRTTMARWVIQVSEKFKPLYAALK
EHLLQQVVVQADETPLNVLKEDKKCYMWLYCSGADSPDAALPNVKNIALYDYQNSRARACPVAFLGDYSGYLQTDGYGAY
DGLHHVTNVGCLAHARRKFMDAKKLQGKGKSGKADKALAKIQKLYGIESCLKGATVETRKAERQLHAKPILDELHDWMTS
QQVLASSSLGKAIKYTLGQWPKLIRYIDDGHLSIDNNRAERAIKPLVIGRKNWLFSNTPNGADASAMLYSIVETAKANGL
ILYDYMVKCMKELAKAEPDIDALLPWNFKY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 25 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004291 [H]

Pfam domain/function: PF03050 Transposase_25 [H]

EC number: NA

Molecular weight: Translated: 57719; Mature: 57719

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTPVINPESQDVAELQAMVKALMVSESQWKQERQSLLEQLKLAFDRQFAKRSEALKPY
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DESQGDLFNEVECEAAKEEEVEVVTTTTTTKKRGKRKPLPKTLPREVIELDLDDHEKQCA
CCCCCCHHHHHHHCCCCCCCEEEEEECCCHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHH
CCQHSLHKIGEDRSEKLEFSPAVLKVLEYVRPKYACRQCEQTEDNSHIVQKPAPQSIIPK
HHHHHHHHHCCCHHHHCCCCHHHHHHHHHHCHHHHHHHHHCCCCCCEEECCCCCCCCCCH
SFATESLLANIILGKYQYAMPLYRQESLFTQSGIELSRTTMARWVIQVSEKFKPLYAALK
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EHLLQQVVVQADETPLNVLKEDKKCYMWLYCSGADSPDAALPNVKNIALYDYQNSRARAC
HHHHHHHHHHCCCCHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCC
PVAFLGDYSGYLQTDGYGAYDGLHHVTNVGCLAHARRKFMDAKKLQGKGKSGKADKALAK
CCCEECCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
IQKLYGIESCLKGATVETRKAERQLHAKPILDELHDWMTSQQVLASSSLGKAIKYTLGQW
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PKLIRYIDDGHLSIDNNRAERAIKPLVIGRKNWLFSNTPNGADASAMLYSIVETAKANGL
HHHHHHHCCCCEEECCCHHHHHHHHHEECCCCCEECCCCCCCHHHHHHHHHHHHHCCCCE
ILYDYMVKCMKELAKAEPDIDALLPWNFKY
EEHHHHHHHHHHHHHCCCCCCEECCCCCCC
>Mature Secondary Structure
MKKTPVINPESQDVAELQAMVKALMVSESQWKQERQSLLEQLKLAFDRQFAKRSEALKPY
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DESQGDLFNEVECEAAKEEEVEVVTTTTTTKKRGKRKPLPKTLPREVIELDLDDHEKQCA
CCCCCCHHHHHHHCCCCCCCEEEEEECCCHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHH
CCQHSLHKIGEDRSEKLEFSPAVLKVLEYVRPKYACRQCEQTEDNSHIVQKPAPQSIIPK
HHHHHHHHHCCCHHHHCCCCHHHHHHHHHHCHHHHHHHHHCCCCCCEEECCCCCCCCCCH
SFATESLLANIILGKYQYAMPLYRQESLFTQSGIELSRTTMARWVIQVSEKFKPLYAALK
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EHLLQQVVVQADETPLNVLKEDKKCYMWLYCSGADSPDAALPNVKNIALYDYQNSRARAC
HHHHHHHHHHCCCCHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCC
PVAFLGDYSGYLQTDGYGAYDGLHHVTNVGCLAHARRKFMDAKKLQGKGKSGKADKALAK
CCCEECCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
IQKLYGIESCLKGATVETRKAERQLHAKPILDELHDWMTSQQVLASSSLGKAIKYTLGQW
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PKLIRYIDDGHLSIDNNRAERAIKPLVIGRKNWLFSNTPNGADASAMLYSIVETAKANGL
HHHHHHHCCCCEEECCCHHHHHHHHHEECCCCCEECCCCCCCHHHHHHHHHHHHHCCCCE
ILYDYMVKCMKELAKAEPDIDALLPWNFKY
EEHHHHHHHHHHHHHCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]