Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156977646

Identifier: 156977646

GI number: 156977646

Start: 1591084

End: 1591611

Strand: Reverse

Name: 156977646

Synonym: VIBHAR_06434

Alternate gene names: NA

Gene position: 1591611-1591084 (Counterclockwise)

Preceding gene: 156977653

Following gene: 156977645

Centisome position: 72.21

GC content: 46.97

Gene sequence:

>528_bases
ATGGAAATTACTTTTCGACAGATAAACATGGATGACGATTTCGAGCTATGTGTTGCATCTAGGAAGGATGCGTACTTTTG
TAGCTTCGGACACTATGATGGCTTCGAGGACTTCATCAGTGGCTATCGTGAGCGAGTCTTGGAACGATTATCGACATCAG
GTTGGTTCTACATTCATATATTTGTGGATGGCGAGTTTGCTGGGCAACTCGAGTTTCGTAGTTTTTCGCCCGAGCAGGAC
ACGGGCTATGTGCACCTTATTTATCTAAAACCGAATTTCCGTGGATTAGGGCTTGCCCCTAAAGTGCAAGAGTATATCGT
CAGAACGTTAAGCCAGGCGGGGTGCTTGCGTGCGGTACTTTCTGTAAGCCGAACGAACACGAGAGCACTCGCTTTTTATA
AGCGCAATGGTTGGGAGTTCGCGCGTCGGAACCCGAAACATGATGAAACCGACTTCTATCAACTTTGGATAGGTCACACG
GTTTACGTTGAGTCTGGATCAAATGGACTATCTGGCGCAAAGCGGTAA

Upstream 100 bases:

>100_bases
GTTGCTACTAGGTTTTCATCCCTGATCGTAGTACCTTATGGGGACGCCGTTTATTCCCTGTTTAGTTAGGCGTTATATTT
GATTGAGGAAAAAGGTAAAG

Downstream 100 bases:

>100_bases
CAGCAGGATAGGTTCGAACATTGGAAAGGCGCTTTTCATCTATCAGGAAGGGCGCCTTTCTTTTGTTCTAGCTATCGCGG
CAAACTACTTTTCACGTATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MEITFRQINMDDDFELCVASRKDAYFCSFGHYDGFEDFISGYRERVLERLSTSGWFYIHIFVDGEFAGQLEFRSFSPEQD
TGYVHLIYLKPNFRGLGLAPKVQEYIVRTLSQAGCLRAVLSVSRTNTRALAFYKRNGWEFARRNPKHDETDFYQLWIGHT
VYVESGSNGLSGAKR

Sequences:

>Translated_175_residues
MEITFRQINMDDDFELCVASRKDAYFCSFGHYDGFEDFISGYRERVLERLSTSGWFYIHIFVDGEFAGQLEFRSFSPEQD
TGYVHLIYLKPNFRGLGLAPKVQEYIVRTLSQAGCLRAVLSVSRTNTRALAFYKRNGWEFARRNPKHDETDFYQLWIGHT
VYVESGSNGLSGAKR
>Mature_175_residues
MEITFRQINMDDDFELCVASRKDAYFCSFGHYDGFEDFISGYRERVLERLSTSGWFYIHIFVDGEFAGQLEFRSFSPEQD
TGYVHLIYLKPNFRGLGLAPKVQEYIVRTLSQAGCLRAVLSVSRTNTRALAFYKRNGWEFARRNPKHDETDFYQLWIGHT
VYVESGSNGLSGAKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20316; Mature: 20316

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEITFRQINMDDDFELCVASRKDAYFCSFGHYDGFEDFISGYRERVLERLSTSGWFYIHI
CCEEEEEECCCCCHHEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEE
FVDGEFAGQLEFRSFSPEQDTGYVHLIYLKPNFRGLGLAPKVQEYIVRTLSQAGCLRAVL
EECCCEECEEEECCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SVSRTNTRALAFYKRNGWEFARRNPKHDETDFYQLWIGHTVYVESGSNGLSGAKR
HHHCCCCEEEEEEECCCCHHHHCCCCCCCCCEEEEEECEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MEITFRQINMDDDFELCVASRKDAYFCSFGHYDGFEDFISGYRERVLERLSTSGWFYIHI
CCEEEEEECCCCCHHEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEE
FVDGEFAGQLEFRSFSPEQDTGYVHLIYLKPNFRGLGLAPKVQEYIVRTLSQAGCLRAVL
EECCCEECEEEECCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SVSRTNTRALAFYKRNGWEFARRNPKHDETDFYQLWIGHTVYVESGSNGLSGAKR
HHHCCCCEEEEEEECCCCHHHHCCCCCCCCCEEEEEECEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA