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The map label for this gene is yjjU [H]

Identifier: 156977627

GI number: 156977627

Start: 1578968

End: 1579885

Strand: Direct

Name: yjjU [H]

Synonym: VIBHAR_06415

Alternate gene names: 156977627

Gene position: 1578968-1579885 (Clockwise)

Preceding gene: 156977620

Following gene: 156977630

Centisome position: 71.64

GC content: 48.69

Gene sequence:

>918_bases
ATGGGCATTAGATCCGTTACTCTAATTAACTCGTATCCCAAATCAAAAAAATCAAAACGGATAGCTAGGATGGAGCAAGT
TGGCTCTCGAGCGCTGATTGTAGAAGGCGGCGCGATGCGTGGGGTGTTCTCCTGCGGCATACTCGATCACTTTATGGAAC
AAGACTTCTCCCCTTTTGACAGCTTTTGGGGCGTCTCGGCGGGCGCTAGTAACTTAGCAGCTTACCTTGCAAAAATGCCG
GGCAGAAACCTCAAGATCTACCTCGATTACAGCTTACGCAAAGAGTTTATCTCCCCCACGCAACTCGTGCGCGGTGGCGA
TATGATGGATTTAGATTGGATGTGGGACGTCACGCTTAAAGAGTTGGGCATTGATCGAGCCGTGCTTTCTGCCGATCCTC
GACCGTTCTTTTTAGGCGTAACACGACAAGACAACGGACAACCAGAATACCTAACACCTTCCGTAGAGATGTTGGCGGAG
ACCATGAAAGCCAGTAGCGCGTTACCAATTATGTACCGCAATGGTGTGCCATTAGATGGCGTAAGGTACGTAGACGGTGG
TGTAGCGGATGCTATTCCTGTTGCTGAAGCCATCAAACGCGGTGCGACAAAAATCATGGTGCTACGGAGTCAACCGGCCA
GTTATCGCAAATCCAAACCTAAGTTTGAAAGGCTCACTTCTCGTTTACTGAAAGATCATCCAGCATTGATCGAGCCAATG
CTTACGCGTCATGTCCGATACAACCAGAGTTTGGAATTAATAAACAATCCACCAGCAGGCGTTGAGATCATTCAAATCTG
CCCACCAGAAGGCTTTAAGTTAAAGCGTTTGAGCCGATCCCCTGAGCCTTTACGTGAAGCTTATGAACTGGGTGTGGAAT
ATGGTCAGCACGCCATCGAGTGCTGGGAACAAAGCTAA

Upstream 100 bases:

>100_bases
CAAAAGACACACGCTACCGTTTAATATTTTTAGTAATTGTTATGTTATAACATAAACCAAAGATTCATCAAGGTGACGAT
CAAGCGAACACAACTTGGGT

Downstream 100 bases:

>100_bases
ACGCTCGCCCAACCCAAAAAGCGGGCTTCACTCAATCACCGATTCTCGGTCATAAAACCTGAACAACAAAAAAAGCCACA
CCATGTCGGTGTGGCTGATG

Product: phospholipase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MGIRSVTLINSYPKSKKSKRIARMEQVGSRALIVEGGAMRGVFSCGILDHFMEQDFSPFDSFWGVSAGASNLAAYLAKMP
GRNLKIYLDYSLRKEFISPTQLVRGGDMMDLDWMWDVTLKELGIDRAVLSADPRPFFLGVTRQDNGQPEYLTPSVEMLAE
TMKASSALPIMYRNGVPLDGVRYVDGGVADAIPVAEAIKRGATKIMVLRSQPASYRKSKPKFERLTSRLLKDHPALIEPM
LTRHVRYNQSLELINNPPAGVEIIQICPPEGFKLKRLSRSPEPLREAYELGVEYGQHAIECWEQS

Sequences:

>Translated_305_residues
MGIRSVTLINSYPKSKKSKRIARMEQVGSRALIVEGGAMRGVFSCGILDHFMEQDFSPFDSFWGVSAGASNLAAYLAKMP
GRNLKIYLDYSLRKEFISPTQLVRGGDMMDLDWMWDVTLKELGIDRAVLSADPRPFFLGVTRQDNGQPEYLTPSVEMLAE
TMKASSALPIMYRNGVPLDGVRYVDGGVADAIPVAEAIKRGATKIMVLRSQPASYRKSKPKFERLTSRLLKDHPALIEPM
LTRHVRYNQSLELINNPPAGVEIIQICPPEGFKLKRLSRSPEPLREAYELGVEYGQHAIECWEQS
>Mature_304_residues
GIRSVTLINSYPKSKKSKRIARMEQVGSRALIVEGGAMRGVFSCGILDHFMEQDFSPFDSFWGVSAGASNLAAYLAKMPG
RNLKIYLDYSLRKEFISPTQLVRGGDMMDLDWMWDVTLKELGIDRAVLSADPRPFFLGVTRQDNGQPEYLTPSVEMLAET
MKASSALPIMYRNGVPLDGVRYVDGGVADAIPVAEAIKRGATKIMVLRSQPASYRKSKPKFERLTSRLLKDHPALIEPML
TRHVRYNQSLELINNPPAGVEIIQICPPEGFKLKRLSRSPEPLREAYELGVEYGQHAIECWEQS

Specific function: Probable lipid hydrolase [H]

COG id: COG4667

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Escherichia coli, GI1790837, Length=305, Percent_Identity=37.7049180327869, Blast_Score=196, Evalue=1e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 34169; Mature: 34038

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIRSVTLINSYPKSKKSKRIARMEQVGSRALIVEGGAMRGVFSCGILDHFMEQDFSPFD
CCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCHHH
SFWGVSAGASNLAAYLAKMPGRNLKIYLDYSLRKEFISPTQLVRGGDMMDLDWMWDVTLK
HHCCCCCCHHHHHHHHHHCCCCCEEEEEEHHHHHHHCCHHHHHCCCCEEEEHHHHHHHHH
ELGIDRAVLSADPRPFFLGVTRQDNGQPEYLTPSVEMLAETMKASSALPIMYRNGVPLDG
HCCCCHHHHCCCCCEEEEEEEECCCCCCCEECHHHHHHHHHHHHCCCCCEEEECCCCCCC
VRYVDGGVADAIPVAEAIKRGATKIMVLRSQPASYRKSKPKFERLTSRLLKDHPALIEPM
EEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCHHHCCCCHHHHHHHHHHHCCCHHHHHH
LTRHVRYNQSLELINNPPAGVEIIQICPPEGFKLKRLSRSPEPLREAYELGVEYGQHAIE
HHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHH
CWEQS
HHCCC
>Mature Secondary Structure 
GIRSVTLINSYPKSKKSKRIARMEQVGSRALIVEGGAMRGVFSCGILDHFMEQDFSPFD
CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCHHH
SFWGVSAGASNLAAYLAKMPGRNLKIYLDYSLRKEFISPTQLVRGGDMMDLDWMWDVTLK
HHCCCCCCHHHHHHHHHHCCCCCEEEEEEHHHHHHHCCHHHHHCCCCEEEEHHHHHHHHH
ELGIDRAVLSADPRPFFLGVTRQDNGQPEYLTPSVEMLAETMKASSALPIMYRNGVPLDG
HCCCCHHHHCCCCCEEEEEEEECCCCCCCEECHHHHHHHHHHHHCCCCCEEEECCCCCCC
VRYVDGGVADAIPVAEAIKRGATKIMVLRSQPASYRKSKPKFERLTSRLLKDHPALIEPM
EEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCHHHCCCCHHHHHHHHHHHCCCHHHHHH
LTRHVRYNQSLELINNPPAGVEIIQICPPEGFKLKRLSRSPEPLREAYELGVEYGQHAIE
HHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHH
CWEQS
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]