| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is caiE [C]
Identifier: 156977624
GI number: 156977624
Start: 1576265
End: 1576798
Strand: Reverse
Name: caiE [C]
Synonym: VIBHAR_06412
Alternate gene names: 156977624
Gene position: 1576798-1576265 (Counterclockwise)
Preceding gene: 156977625
Following gene: 156977623
Centisome position: 71.54
GC content: 48.13
Gene sequence:
>534_bases ATGCCTGAAGTTTCGGAAACAGCGTTCATCGATCCGACGGCGATCATCTGTGGCAAAGTGATCATTGAAGATAACGTTTT TATTGGTCCTTATGCGGTGATTCGTGCTGATGAAGTGAACGAGCAAGGCGATATGGAAGCCATCGTCATCAAGCGCGATA CTAACATTCAAGATGGTGTGGTCATCCACTCAAAAGCCGGTGCAGCTGTGACCATTGGAGAGCGTTCGTCGATTGCGCAC CGTTCTATTATTCATGGCCCATGTGAAGTCAGTGATGACGTGTTTATCGGTTTTAACTCCGTGGTGTTTAATGCTGTGAT TGGCACAGGTTGTGTGATTCGCCATAACTGTGTGGTAGATGGACTAGACTTGCCAGAGAATTTCCATGTTCCGCCGATGA CCAATATCGGCGCCGACTTTGATTTGAACAGCATCTCCAAAGTGCCGCCAGAATACTCGGCGTTTTCGGAGTCTGTGGTT TCGGCAAACCACGAGCTGGTGCAAGGCTATAGGAGAATTGTCAATGAGCTCTGA
Upstream 100 bases:
>100_bases TTGGGCTTTATTTGTAGAGGTATAGTTGTCGTAGCTTGAGTGTCTTTGAGGCACCGAATAAAGAGAAATCAATATGTTAA GAAGAAATCCTACTGGTCAC
Downstream 100 bases:
>100_bases GAACCAACCCATACTTGGTGTTCCTACTAACATCATTACTGGGTTTCTGGGCGTAGGAAAGACCTCTGCGATTTTGAATT TGATGGCGAACAAGCAAGAG
Product: carbonic anhydrase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MPEVSETAFIDPTAIICGKVIIEDNVFIGPYAVIRADEVNEQGDMEAIVIKRDTNIQDGVVIHSKAGAAVTIGERSSIAH RSIIHGPCEVSDDVFIGFNSVVFNAVIGTGCVIRHNCVVDGLDLPENFHVPPMTNIGADFDLNSISKVPPEYSAFSESVV SANHELVQGYRRIVNEL
Sequences:
>Translated_177_residues MPEVSETAFIDPTAIICGKVIIEDNVFIGPYAVIRADEVNEQGDMEAIVIKRDTNIQDGVVIHSKAGAAVTIGERSSIAH RSIIHGPCEVSDDVFIGFNSVVFNAVIGTGCVIRHNCVVDGLDLPENFHVPPMTNIGADFDLNSISKVPPEYSAFSESVV SANHELVQGYRRIVNEL >Mature_176_residues PEVSETAFIDPTAIICGKVIIEDNVFIGPYAVIRADEVNEQGDMEAIVIKRDTNIQDGVVIHSKAGAAVTIGERSSIAHR SIIHGPCEVSDDVFIGFNSVVFNAVIGTGCVIRHNCVVDGLDLPENFHVPPMTNIGADFDLNSISKVPPEYSAFSESVVS ANHELVQGYRRIVNEL
Specific function: Reversible hydration of carbon dioxide. Essential to photosynthetic carbon dioxide fixation [H]
COG id: COG0663
COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-class carbonic anhydrase family [H]
Homologues:
Organism=Escherichia coli, GI87081681, Length=109, Percent_Identity=37.6146788990826, Blast_Score=76, Evalue=1e-15, Organism=Escherichia coli, GI1787667, Length=129, Percent_Identity=34.8837209302326, Blast_Score=74, Evalue=4e-15, Organism=Escherichia coli, GI87082240, Length=129, Percent_Identity=29.4573643410853, Blast_Score=65, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011004 [H]
Pfam domain/function: NA
EC number: =4.2.1.1 [H]
Molecular weight: Translated: 19120; Mature: 18989
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEVSETAFIDPTAIICGKVIIEDNVFIGPYAVIRADEVNEQGDMEAIVIKRDTNIQDGV CCCCCCCEEECCHHHHHCEEEEECCEEECCEEEEEECCCCCCCCEEEEEEEECCCCCCCE VIHSKAGAAVTIGERSSIAHRSIIHGPCEVSDDVFIGFNSVVFNAVIGTGCVIRHNCVVD EEECCCCCEEEECCCCCHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHCCEEEEECEEEE GLDLPENFHVPPMTNIGADFDLNSISKVPPEYSAFSESVVSANHELVQGYRRIVNEL CCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCC >Mature Secondary Structure PEVSETAFIDPTAIICGKVIIEDNVFIGPYAVIRADEVNEQGDMEAIVIKRDTNIQDGV CCCCCCEEECCHHHHHCEEEEECCEEECCEEEEEECCCCCCCCEEEEEEEECCCCCCCE VIHSKAGAAVTIGERSSIAHRSIIHGPCEVSDDVFIGFNSVVFNAVIGTGCVIRHNCVVD EEECCCCCEEEECCCCCHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHCCEEEEECEEEE GLDLPENFHVPPMTNIGADFDLNSISKVPPEYSAFSESVVSANHELVQGYRRIVNEL CCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8041719; 8665839; 10924115 [H]