| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is carB3 [H]
Identifier: 156977582
GI number: 156977582
Start: 1544367
End: 1545218
Strand: Direct
Name: carB3 [H]
Synonym: VIBHAR_06370
Alternate gene names: 156977582
Gene position: 1544367-1545218 (Clockwise)
Preceding gene: 156977581
Following gene: 156977583
Centisome position: 70.07
GC content: 47.07
Gene sequence:
>852_bases ATGAAAAAGCTATTTCTACTACTTGGACTGTTAGCCTGTTCAAGTGCAACGTACGCCGCCAAACTTAATGAAGACATCTC CGCGATTGAAGAGCATATTTCGGGTCGAATCGGAGTGTCTGTCTGGAATACTCAAACCGATGATCATTGGGACTATAGAG GCGACGAGCGCTTCCCGATGATGAGCACATTCAAAACGCTTGCATGTGCAACGATGCTTAGTGACATGGATAATGAAAAG CTCGACAAAAACGCCACTGCCAAAGTAGAAGAGCGCAATATGGTGGTTTGGTCACCAGTAATGGATCGTATGGCAGGTCA AACAACGCGTATTGAACATGCTTGTGAAGCCACAATGCTGATGAGCGACAATACCGCAGCCAACATTGTTTTGCGTAGCA TTGGTGGACCACGCGGTGTCACCACGTTCTTGCGTTCTGTCGGTGATAAAGCAACGCGCCTTGACCGTTTTGAACCAAGA CTGAACGAGGCGAACCCAGGCGACAAGCGAGACACCACAACACCTAACGCCATGGTAAATACACTGCACACGTTGTTAGA AGGTGATGCGCTATCCTACGAATCACGCATTCAATTAAAGATCTGGATGCAGGATAACAAGGTCTCTGATTCTTTGATGC GCTCTGTGTTACCAAAGGGTTGGTCGATTGCCGATCGTTCTGGCGCAGGGGGCTTTGGGTCACGCGGCATCACAGCAATG ATCTGGAAAGAGAATCATAAACCGATCTACATAAGCATTTACATTACTGAAACCGATTTATCCTTGCAGGCGCGCGATCA GATTATCGCTCAAGTGAGCCAGTTAATACTGGATGAGTACAATACTATTTAG
Upstream 100 bases:
>100_bases AAAGACAATAATCTAACAGTCATTAGAGTATTAACTCGCTATAGTTCGACTACATTCGCCTGAGTGTGAACCGAAATAAA TAACACTAAGAAAATCAATA
Downstream 100 bases:
>100_bases CACTCGCTAAATACTAAAAAACGGAGCTTTTCGAGCTCCGTTTTTTGTGGCGGGTAGCCTTACCAGTAAGCAGGACTATC CAAACCTTTCACGCAAGAGG
Product: beta-lactamase
Products: NA
Alternate protein names: Carbenicillinase 3 [H]
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MKKLFLLLGLLACSSATYAAKLNEDISAIEEHISGRIGVSVWNTQTDDHWDYRGDERFPMMSTFKTLACATMLSDMDNEK LDKNATAKVEERNMVVWSPVMDRMAGQTTRIEHACEATMLMSDNTAANIVLRSIGGPRGVTTFLRSVGDKATRLDRFEPR LNEANPGDKRDTTTPNAMVNTLHTLLEGDALSYESRIQLKIWMQDNKVSDSLMRSVLPKGWSIADRSGAGGFGSRGITAM IWKENHKPIYISIYITETDLSLQARDQIIAQVSQLILDEYNTI
Sequences:
>Translated_283_residues MKKLFLLLGLLACSSATYAAKLNEDISAIEEHISGRIGVSVWNTQTDDHWDYRGDERFPMMSTFKTLACATMLSDMDNEK LDKNATAKVEERNMVVWSPVMDRMAGQTTRIEHACEATMLMSDNTAANIVLRSIGGPRGVTTFLRSVGDKATRLDRFEPR LNEANPGDKRDTTTPNAMVNTLHTLLEGDALSYESRIQLKIWMQDNKVSDSLMRSVLPKGWSIADRSGAGGFGSRGITAM IWKENHKPIYISIYITETDLSLQARDQIIAQVSQLILDEYNTI >Mature_283_residues MKKLFLLLGLLACSSATYAAKLNEDISAIEEHISGRIGVSVWNTQTDDHWDYRGDERFPMMSTFKTLACATMLSDMDNEK LDKNATAKVEERNMVVWSPVMDRMAGQTTRIEHACEATMLMSDNTAANIVLRSIGGPRGVTTFLRSVGDKATRLDRFEPR LNEANPGDKRDTTTPNAMVNTLHTLLEGDALSYESRIQLKIWMQDNKVSDSLMRSVLPKGWSIADRSGAGGFGSRGITAM IWKENHKPIYISIYITETDLSLQARDQIIAQVSQLILDEYNTI
Specific function: Hydrolyzes both carbenicillin and oxacillin [H]
COG id: COG2367
COG function: function code V; Beta-lactamase class A
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-A beta-lactamase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001466 - InterPro: IPR000871 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: =3.5.2.6 [H]
Molecular weight: Translated: 31657; Mature: 31657
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: PS00146 BETA_LACTAMASE_A
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLFLLLGLLACSSATYAAKLNEDISAIEEHISGRIGVSVWNTQTDDHWDYRGDERFPM CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCH MSTFKTLACATMLSDMDNEKLDKNATAKVEERNMVVWSPVMDRMAGQTTRIEHACEATML HHHHHHHHHHHHHHHCCCHHCCCCCCCEEECCCEEEEHHHHHHHCCCCHHHHHHHHEEEE MSDNTAANIVLRSIGGPRGVTTFLRSVGDKATRLDRFEPRLNEANPGDKRDTTTPNAMVN ECCCCHHHHHEECCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH TLHTLLEGDALSYESRIQLKIWMQDNKVSDSLMRSVLPKGWSIADRSGAGGFGSRGITAM HHHHHHCCCCCCCCCEEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEE IWKENHKPIYISIYITETDLSLQARDQIIAQVSQLILDEYNTI EEECCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKLFLLLGLLACSSATYAAKLNEDISAIEEHISGRIGVSVWNTQTDDHWDYRGDERFPM CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCH MSTFKTLACATMLSDMDNEKLDKNATAKVEERNMVVWSPVMDRMAGQTTRIEHACEATML HHHHHHHHHHHHHHHCCCHHCCCCCCCEEECCCEEEEHHHHHHHCCCCHHHHHHHHEEEE MSDNTAANIVLRSIGGPRGVTTFLRSVGDKATRLDRFEPRLNEANPGDKRDTTTPNAMVN ECCCCHHHHHEECCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH TLHTLLEGDALSYESRIQLKIWMQDNKVSDSLMRSVLPKGWSIADRSGAGGFGSRGITAM HHHHHHCCCCCCCCCEEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEE IWKENHKPIYISIYITETDLSLQARDQIIAQVSQLILDEYNTI EEECCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1650733 [H]