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The map label for this gene is ykgB [H]

Identifier: 156977556

GI number: 156977556

Start: 1510958

End: 1512004

Strand: Reverse

Name: ykgB [H]

Synonym: VIBHAR_06344

Alternate gene names: 156977556

Gene position: 1512004-1510958 (Counterclockwise)

Preceding gene: 156977557

Following gene: 156977555

Centisome position: 68.6

GC content: 45.75

Gene sequence:

>1047_bases
ATGATAGTAAATGGTCACTTACATTTTTATGTAGGCACCTATACCGATTCACCAAGCCAAAGTCAGGGCATTGCGTGTGT
TTCTCTCGATACTGCTACTGGCGCATTAACGCTCATTAATGAACTTGTTCCAGACGCAGTAAAAACGATTCGTAACCCTT
CTTACCTTGCGCTCAAAGGAGAGGGTTTATATACCTTTAATGAAGTCGATCGCGTGGCAGGTGCAGAGCTGATATTTGCT
GAAAAAACAGACAGCTATGGATTGCCAATTGAAGGTGACTACCCTTGCCATATCGACATTAAAGAAGAGTTACTCGCTGT
TGCAAACTACGGTTCCGGCAATGTAAGTGTTTACCAACTTGATGAACAAGGTAAGCCGTTGAAATCCATTGCAGAATTGT
ATGTAGAAGGCAATGGGCCGAATATTGACCGTCAGACTTCACCTCATGCCCACCAAGTCACTTTTCTAAAACACTCCGCT
CAATTGGCTGTGGTCGATTTAGGTACAGACCGTGTTCATTTCTATGACTACGGCAATGATGGTGAGACAGTTAACTTTCC
ACTTTCTCAAAGTGTCGCTATGCCTGCTGGCTCAGGGCCTCGTCATTTGATCTTCAATCGTGATGAATCTGTTGCGTACG
TTGTTTGCGAATTGTCTGAAACTCTGGTGGTACTTCGCAAGCAAAACGGACAATGGAATCTGACTCAGCAAGTTAAACTG
CTAGCCGATGAAGAGAACAAAGAAGCGGCGTCTGCGATTCGTCTCTCTGCGGATGAGCGCTTTGTCTATGTCTCATGCCG
CGCGCAAAATCTGATCAGTACATTTGATGTAACGAGTAATACTCCGGTTCAAATTGCGGCGTCCGATTGTGGTGGCGCGT
TCCCAAGAGATTTTGTTTTATCCCGTGACGGGCAGTGGATGCTCGTTGCTAATCAACATTCAGATAATGTCGCTAGCTTC
CATAGGAATCCGGAAACTGGCGTTATCACTCCAACCGGATATTCGTGCGACATCGGTGCGCCTGTGTGTTTGGTTGAGAA
GCCGTAA

Upstream 100 bases:

>100_bases
CTTCACACTTTAACCGATTGATAACTAAAAGGGATTGCCGTCTGGTAACGCAGGCGGCATCTTATCGGTTAAGCACTCTT
TTATCTCCTAAAGGTTTCCC

Downstream 100 bases:

>100_bases
TTAAGAGAAACAACATGACAATTCATCGTATTAATCCATGCAAACGTTGGTCTGATGTAACGGTATTCAACGGTATTGCC
AACTTTGTTGAGGTGGCAGA

Product: 6-phosphogluconolactonase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MIVNGHLHFYVGTYTDSPSQSQGIACVSLDTATGALTLINELVPDAVKTIRNPSYLALKGEGLYTFNEVDRVAGAELIFA
EKTDSYGLPIEGDYPCHIDIKEELLAVANYGSGNVSVYQLDEQGKPLKSIAELYVEGNGPNIDRQTSPHAHQVTFLKHSA
QLAVVDLGTDRVHFYDYGNDGETVNFPLSQSVAMPAGSGPRHLIFNRDESVAYVVCELSETLVVLRKQNGQWNLTQQVKL
LADEENKEAASAIRLSADERFVYVSCRAQNLISTFDVTSNTPVQIAASDCGGAFPRDFVLSRDGQWMLVANQHSDNVASF
HRNPETGVITPTGYSCDIGAPVCLVEKP

Sequences:

>Translated_348_residues
MIVNGHLHFYVGTYTDSPSQSQGIACVSLDTATGALTLINELVPDAVKTIRNPSYLALKGEGLYTFNEVDRVAGAELIFA
EKTDSYGLPIEGDYPCHIDIKEELLAVANYGSGNVSVYQLDEQGKPLKSIAELYVEGNGPNIDRQTSPHAHQVTFLKHSA
QLAVVDLGTDRVHFYDYGNDGETVNFPLSQSVAMPAGSGPRHLIFNRDESVAYVVCELSETLVVLRKQNGQWNLTQQVKL
LADEENKEAASAIRLSADERFVYVSCRAQNLISTFDVTSNTPVQIAASDCGGAFPRDFVLSRDGQWMLVANQHSDNVASF
HRNPETGVITPTGYSCDIGAPVCLVEKP
>Mature_348_residues
MIVNGHLHFYVGTYTDSPSQSQGIACVSLDTATGALTLINELVPDAVKTIRNPSYLALKGEGLYTFNEVDRVAGAELIFA
EKTDSYGLPIEGDYPCHIDIKEELLAVANYGSGNVSVYQLDEQGKPLKSIAELYVEGNGPNIDRQTSPHAHQVTFLKHSA
QLAVVDLGTDRVHFYDYGNDGETVNFPLSQSVAMPAGSGPRHLIFNRDESVAYVVCELSETLVVLRKQNGQWNLTQQVKL
LADEENKEAASAIRLSADERFVYVSCRAQNLISTFDVTSNTPVQIAASDCGGAFPRDFVLSRDGQWMLVANQHSDNVASF
HRNPETGVITPTGYSCDIGAPVCLVEKP

Specific function: Unknown

COG id: COG2706

COG function: function code G; 3-carboxymuconate cyclase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cycloisomerase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786983, Length=344, Percent_Identity=26.453488372093, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011048
- InterPro:   IPR019405
- InterPro:   IPR015943 [H]

Pfam domain/function: PF10282 DUF2394 [H]

EC number: NA

Molecular weight: Translated: 37902; Mature: 37902

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVNGHLHFYVGTYTDSPSQSQGIACVSLDTATGALTLINELVPDAVKTIRNPSYLALKG
CEEECEEEEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEC
EGLYTFNEVDRVAGAELIFAEKTDSYGLPIEGDYPCHIDIKEELLAVANYGSGNVSVYQL
CCEEEHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEHHHHEEEEEECCCCCEEEEEE
DEQGKPLKSIAELYVEGNGPNIDRQTSPHAHQVTFLKHSAQLAVVDLGTDRVHFYDYGND
CCCCCCHHHHEEEEEECCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCEEEEEEECCC
GETVNFPLSQSVAMPAGSGPRHLIFNRDESVAYVVCELSETLVVLRKQNGQWNLTQQVKL
CCEEEECCCCCEECCCCCCCCEEEEECCCCEEEEEEECCCEEEEEEECCCCCCHHEEEEE
LADEENKEAASAIRLSADERFVYVSCRAQNLISTFDVTSNTPVQIAASDCGGAFPRDFVL
EECCCCCCCHHEEEEECCCEEEEEEEECCCCEEEEECCCCCCEEEEECCCCCCCCCCEEE
SRDGQWMLVANQHSDNVASFHRNPETGVITPTGYSCDIGAPVCLVEKP
ECCCCEEEEEECCCCCHHHHCCCCCCCEEECCCCCCCCCCCEEEEECC
>Mature Secondary Structure
MIVNGHLHFYVGTYTDSPSQSQGIACVSLDTATGALTLINELVPDAVKTIRNPSYLALKG
CEEECEEEEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEC
EGLYTFNEVDRVAGAELIFAEKTDSYGLPIEGDYPCHIDIKEELLAVANYGSGNVSVYQL
CCEEEHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEHHHHEEEEEECCCCCEEEEEE
DEQGKPLKSIAELYVEGNGPNIDRQTSPHAHQVTFLKHSAQLAVVDLGTDRVHFYDYGND
CCCCCCHHHHEEEEEECCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCEEEEEEECCC
GETVNFPLSQSVAMPAGSGPRHLIFNRDESVAYVVCELSETLVVLRKQNGQWNLTQQVKL
CCEEEECCCCCEECCCCCCCCEEEEECCCCEEEEEEECCCEEEEEEECCCCCCHHEEEEE
LADEENKEAASAIRLSADERFVYVSCRAQNLISTFDVTSNTPVQIAASDCGGAFPRDFVL
EECCCCCCCHHEEEEECCCEEEEEEEECCCCEEEEECCCCCCEEEEECCCCCCCCCCEEE
SRDGQWMLVANQHSDNVASFHRNPETGVITPTGYSCDIGAPVCLVEKP
ECCCCEEEEEECCCCCHHHHCCCCCCCEEECCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]