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The map label for this gene is yoaB [C]

Identifier: 156977555

GI number: 156977555

Start: 1510581

End: 1510943

Strand: Reverse

Name: yoaB [C]

Synonym: VIBHAR_06343

Alternate gene names: 156977555

Gene position: 1510943-1510581 (Counterclockwise)

Preceding gene: 156977556

Following gene: 156977554

Centisome position: 68.55

GC content: 47.38

Gene sequence:

>363_bases
ATGACAATTCATCGTATTAATCCATGCAAACGTTGGTCTGATGTAACGGTATTCAACGGTATTGCCAACTTTGTTGAGGT
GGCAGAAGCTGACACCACTGCGGATATGAAAGGGCAAGTACAACAGATTTTCGACCAAGCCGAGCAAATGCTAGCCAGTG
TTGATAGCGATAAGTCGCGCATCTTATCTGTGACGATTTACGTGACAGATTTTGCTAACTTCGATGCCCTTAACGAAGTA
TGGGATGCGTGGTTCCCTGAGGGATGCGCACCGAGCCGTGCTTGCGTCAAAGTTGAATTGGCGAATCCTGAGCTGTTGGT
AGAAATGGCGTTTGTTGCTGCTGCGGGTGAGAAGTTCCAATAG

Upstream 100 bases:

>100_bases
ATAGGAATCCGGAAACTGGCGTTATCACTCCAACCGGATATTCGTGCGACATCGGTGCGCCTGTGTGTTTGGTTGAGAAG
CCGTAATTAAGAGAAACAAC

Downstream 100 bases:

>100_bases
TTCGATATCACTCTACTTAAACCATTAAGCCCAGCGTTATCCTCAAGCCTTGTGTTATATAGCTCAATAACGCAGGGCTT
TGTTTTATTAGGCTAATCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MTIHRINPCKRWSDVTVFNGIANFVEVAEADTTADMKGQVQQIFDQAEQMLASVDSDKSRILSVTIYVTDFANFDALNEV
WDAWFPEGCAPSRACVKVELANPELLVEMAFVAAAGEKFQ

Sequences:

>Translated_120_residues
MTIHRINPCKRWSDVTVFNGIANFVEVAEADTTADMKGQVQQIFDQAEQMLASVDSDKSRILSVTIYVTDFANFDALNEV
WDAWFPEGCAPSRACVKVELANPELLVEMAFVAAAGEKFQ
>Mature_119_residues
TIHRINPCKRWSDVTVFNGIANFVEVAEADTTADMKGQVQQIFDQAEQMLASVDSDKSRILSVTIYVTDFANFDALNEVW
DAWFPEGCAPSRACVKVELANPELLVEMAFVAAAGEKFQ

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI87081979, Length=114, Percent_Identity=40.3508771929825, Blast_Score=79, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 13335; Mature: 13204

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIHRINPCKRWSDVTVFNGIANFVEVAEADTTADMKGQVQQIFDQAEQMLASVDSDKSR
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCE
ILSVTIYVTDFANFDALNEVWDAWFPEGCAPSRACVKVELANPELLVEMAFVAAAGEKFQ
EEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TIHRINPCKRWSDVTVFNGIANFVEVAEADTTADMKGQVQQIFDQAEQMLASVDSDKSR
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCE
ILSVTIYVTDFANFDALNEVWDAWFPEGCAPSRACVKVELANPELLVEMAFVAAAGEKFQ
EEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA