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The map label for this gene is ctaG [H]

Identifier: 156977483

GI number: 156977483

Start: 1451339

End: 1451929

Strand: Reverse

Name: ctaG [H]

Synonym: VIBHAR_06270

Alternate gene names: 156977483

Gene position: 1451929-1451339 (Counterclockwise)

Preceding gene: 156977484

Following gene: 156977482

Centisome position: 65.88

GC content: 45.85

Gene sequence:

>591_bases
ATGCAAAGTAATTCATCCAATAAAAAACTCACTATCAAGTTGCTGTTAGCGACTGCGCTGATGTTCGGCTTCGGTTTTGC
TCTTGTGCCACTCTACGACATCATGTGCGATGCGCTTGGCATTAACGGCAAAACCAGTGATGTGGCAGCGATTCAACTAA
CGGGCATGCAAGCAGATATCACCAGAACCATTCGCGTGGAATTTATGGCACACGTAAGCCCAGATATGCCTTGGGAATTC
AAACCCAAGGTTGTATCCATGGATGTTCATCCGGGCGAAGTGATTCAAACTGAATATCTTGCATTTAATCAAAGTGGCGA
AGACTTGGTAGGGCAAGCTGTACCATCCGTATCGCCGGGTACTGGTGCTGCTTACTTCAATAAAATCGAGTGTTTTTGCT
TCAATCAACAACCATTGGAAGGTAAGCAACAAGCGAGTATGCCTTTGATTTTCTACATTGAACCGGATGTGCCGGATTCA
ATTCATACATTGACCTTGTCTTACACACTCTACAAATTTCCTCCTCAATCGGGCGAGTCGTCGGTAGTTAGCCTCTCAAG
GAGTGAGCAACAGGCGGGTGAGCGTCTGTAA

Upstream 100 bases:

>100_bases
AACGTGCAGAAGGTTTAGAGTGGACGGTGCCAAGTCCTGCTCCGCATCATACGTTCACAACACCGCCAAAAGTTGATTAA
GAAAGCGTGAGGTGAGTGAG

Downstream 100 bases:

>100_bases
GGAGAGAACTTATGAGTAACAAGCCTGAGACCTATTATGTTCCTGCACAGAGCAGCTGGCCTATTGTTGGGGCATTTGCG
TTATTCCTTGTTGCGGTCGG

Product: cytochrome C oxidase assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MQSNSSNKKLTIKLLLATALMFGFGFALVPLYDIMCDALGINGKTSDVAAIQLTGMQADITRTIRVEFMAHVSPDMPWEF
KPKVVSMDVHPGEVIQTEYLAFNQSGEDLVGQAVPSVSPGTGAAYFNKIECFCFNQQPLEGKQQASMPLIFYIEPDVPDS
IHTLTLSYTLYKFPPQSGESSVVSLSRSEQQAGERL

Sequences:

>Translated_196_residues
MQSNSSNKKLTIKLLLATALMFGFGFALVPLYDIMCDALGINGKTSDVAAIQLTGMQADITRTIRVEFMAHVSPDMPWEF
KPKVVSMDVHPGEVIQTEYLAFNQSGEDLVGQAVPSVSPGTGAAYFNKIECFCFNQQPLEGKQQASMPLIFYIEPDVPDS
IHTLTLSYTLYKFPPQSGESSVVSLSRSEQQAGERL
>Mature_196_residues
MQSNSSNKKLTIKLLLATALMFGFGFALVPLYDIMCDALGINGKTSDVAAIQLTGMQADITRTIRVEFMAHVSPDMPWEF
KPKVVSMDVHPGEVIQTEYLAFNQSGEDLVGQAVPSVSPGTGAAYFNKIECFCFNQQPLEGKQQASMPLIFYIEPDVPDS
IHTLTLSYTLYKFPPQSGESSVVSLSRSEQQAGERL

Specific function: Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I [H]

COG id: COG3175

COG function: function code O; Cytochrome oxidase assembly factor

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the COX11/CtaG family [H]

Homologues:

Organism=Homo sapiens, GI4758034, Length=178, Percent_Identity=30.8988764044944, Blast_Score=103, Evalue=1e-22,
Organism=Homo sapiens, GI242247057, Length=131, Percent_Identity=29.0076335877863, Blast_Score=65, Evalue=3e-11,
Organism=Homo sapiens, GI242247061, Length=131, Percent_Identity=29.0076335877863, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71990692, Length=178, Percent_Identity=31.4606741573034, Blast_Score=106, Evalue=1e-23,
Organism=Saccharomyces cerevisiae, GI6325125, Length=182, Percent_Identity=35.1648351648352, Blast_Score=115, Evalue=5e-27,
Organism=Drosophila melanogaster, GI24581944, Length=159, Percent_Identity=35.2201257861635, Blast_Score=111, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007533 [H]

Pfam domain/function: PF04442 CtaG_Cox11 [H]

EC number: NA

Molecular weight: Translated: 21506; Mature: 21506

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSNSSNKKLTIKLLLATALMFGFGFALVPLYDIMCDALGINGKTSDVAAIQLTGMQADI
CCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCC
TRTIRVEFMAHVSPDMPWEFKPKVVSMDVHPGEVIQTEYLAFNQSGEDLVGQAVPSVSPG
EEEEEEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCHHHHHCCCCCCCC
TGAAYFNKIECFCFNQQPLEGKQQASMPLIFYIEPDVPDSIHTLTLSYTLYKFPPQSGES
CCCCEECEEEEEEECCCCCCCCHHCCCCEEEEECCCCCCCEEEEEEEEEEEECCCCCCCC
SVVSLSRSEQQAGERL
CEEEECCCHHHCCCCC
>Mature Secondary Structure
MQSNSSNKKLTIKLLLATALMFGFGFALVPLYDIMCDALGINGKTSDVAAIQLTGMQADI
CCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCC
TRTIRVEFMAHVSPDMPWEFKPKVVSMDVHPGEVIQTEYLAFNQSGEDLVGQAVPSVSPG
EEEEEEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCHHHHHCCCCCCCC
TGAAYFNKIECFCFNQQPLEGKQQASMPLIFYIEPDVPDSIHTLTLSYTLYKFPPQSGES
CCCCEECEEEEEEECCCCCCCCHHCCCCEEEEECCCCCCCEEEEEEEEEEEECCCCCCCC
SVVSLSRSEQQAGERL
CEEEECCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA