| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977445
Identifier: 156977445
GI number: 156977445
Start: 1412185
End: 1412703
Strand: Reverse
Name: 156977445
Synonym: VIBHAR_06232
Alternate gene names: NA
Gene position: 1412703-1412185 (Counterclockwise)
Preceding gene: 156977448
Following gene: 156977443
Centisome position: 64.1
GC content: 45.66
Gene sequence:
>519_bases TTGACGCAAACTGCTTATGCGCAGGGGGCATGGTGGCAAGCTATATTATCGGACGCATCTGTCGTTGAGGTTCAACAGAC TTTGCAAGAGGGCGGAGAGTGGTATACCTGTGAGGCGCAAGAAAGTGCAGGTGCATTCTGTTTGGATGACTTTCACTACT ATCAGCAACATCTCTATGGAGAAGCAACAACAGAGGCAAAAGCAATACGTCTAATCTTTCTCACGGACTACCAACCGCAA AATCTAAGTGAGCTGATACTGAACCTGAGAAAAGATGGATTGGTGATGAAGCGAATAGCAATACAAGGTGAGCAGTACGA TGTTGCTGAAGCATTAAAACACAACTCGCCAGAAGTGGTCGATAAAGCACTGGTCCTATTTATCAACCGCTACCCTCAGC AAGTACCACGTCGTATTGATTGGGTTTTAGCACAAGAGTTTGGTTCTCCAGCCCCGAGATTAAACGTCACCTTAAACAGT GATGGCGAGATGATTGAGCTAGAGGTGATTCGTTTCTAA
Upstream 100 bases:
>100_bases ACTTACAGCAAAGATAAAGCTCTCATTCATCTTCTTGAGTTAGCTTAATAGTAAGGCCATGCTGCGTTTTTATTTTTGTT CGTTGCTCTCCCTCTGTTTA
Downstream 100 bases:
>100_bases AGTGCCATGCTTTAGCTCTCTGATGTTTCCGTTTTATTCTCATGGTGCAAGGCTAAAAATGTAGCCATTGCTGACTCGTC CAAAAATCCATCCGACTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MTQTAYAQGAWWQAILSDASVVEVQQTLQEGGEWYTCEAQESAGAFCLDDFHYYQQHLYGEATTEAKAIRLIFLTDYQPQ NLSELILNLRKDGLVMKRIAIQGEQYDVAEALKHNSPEVVDKALVLFINRYPQQVPRRIDWVLAQEFGSPAPRLNVTLNS DGEMIELEVIRF
Sequences:
>Translated_172_residues MTQTAYAQGAWWQAILSDASVVEVQQTLQEGGEWYTCEAQESAGAFCLDDFHYYQQHLYGEATTEAKAIRLIFLTDYQPQ NLSELILNLRKDGLVMKRIAIQGEQYDVAEALKHNSPEVVDKALVLFINRYPQQVPRRIDWVLAQEFGSPAPRLNVTLNS DGEMIELEVIRF >Mature_171_residues TQTAYAQGAWWQAILSDASVVEVQQTLQEGGEWYTCEAQESAGAFCLDDFHYYQQHLYGEATTEAKAIRLIFLTDYQPQN LSELILNLRKDGLVMKRIAIQGEQYDVAEALKHNSPEVVDKALVLFINRYPQQVPRRIDWVLAQEFGSPAPRLNVTLNSD GEMIELEVIRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19641; Mature: 19510
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTAYAQGAWWQAILSDASVVEVQQTLQEGGEWYTCEAQESAGAFCLDDFHYYQQHLYG CCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCCCEEHHHHHHHHHHHCC EATTEAKAIRLIFLTDYQPQNLSELILNLRKDGLVMKRIAIQGEQYDVAEALKHNSPEVV CCCCCCEEEEEEEEECCCCCCHHHHHHHHHCCCCEEHHHHHCCCCCCHHHHHHCCCHHHH DKALVLFINRYPQQVPRRIDWVLAQEFGSPAPRLNVTLNSDGEMIELEVIRF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEEEC >Mature Secondary Structure TQTAYAQGAWWQAILSDASVVEVQQTLQEGGEWYTCEAQESAGAFCLDDFHYYQQHLYG CCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCCCEEHHHHHHHHHHHCC EATTEAKAIRLIFLTDYQPQNLSELILNLRKDGLVMKRIAIQGEQYDVAEALKHNSPEVV CCCCCCEEEEEEEEECCCCCCHHHHHHHHHCCCCEEHHHHHCCCCCCHHHHHHCCCHHHH DKALVLFINRYPQQVPRRIDWVLAQEFGSPAPRLNVTLNSDGEMIELEVIRF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA