| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
Click here to switch to the map view.
The map label for this gene is 156977444
Identifier: 156977444
GI number: 156977444
Start: 1411754
End: 1412173
Strand: Direct
Name: 156977444
Synonym: VIBHAR_06231
Alternate gene names: NA
Gene position: 1411754-1412173 (Clockwise)
Preceding gene: 156977438
Following gene: 156977446
Centisome position: 64.05
GC content: 47.62
Gene sequence:
>420_bases ATGTCTTTTGCCCAACGACTCGCCACGTTAATTGGCGAAGAAAGCATCAGCGGTTTTGCTCGACGCGTCGACGTTTCCGA GGCTTTAATTCGCAAATATCTCAAAGGAAGCGAACCCAGCTTAACCAAAGCCAACCAAATCGCAATGCGAGCCAACTGCT CATTGGAGTGGCTAGCCACCGGCTGTGGCTATTTATACCGTCAGGCAGAGGTTGTGGATATGGAAGCCTACAAACTTGCC TTCCAGCACGTCATGAGTGGAACGATCTCTCAGGTTGAAGAAACACAACATCGCAAACTGATTGCGGGTTACCAGTATCT GCGTGCTCATAAAAAGTCGGATGGATTTTTGGACGAGTCAGCAATGGCTACATTTTTAGCCTTGCACCATGAGAATAAAA CGGAAACATCAGAGAGCTAA
Upstream 100 bases:
>100_bases CCATGTGTTTCTCTCCTTTTCTTAATCTGCATTCATCCTAGTCTTGTTTTACCGCTTGCTCAACGGGTAAACTTTCGCAA TTCGAACTGGAGTACGAAAT
Downstream 100 bases:
>100_bases AGCATGGCACTTTAGAAACGAATCACCTCTAGCTCAATCATCTCGCCATCACTGTTTAAGGTGACGTTTAATCTCGGGGC TGGAGAACCAAACTCTTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MSFAQRLATLIGEESISGFARRVDVSEALIRKYLKGSEPSLTKANQIAMRANCSLEWLATGCGYLYRQAEVVDMEAYKLA FQHVMSGTISQVEETQHRKLIAGYQYLRAHKKSDGFLDESAMATFLALHHENKTETSES
Sequences:
>Translated_139_residues MSFAQRLATLIGEESISGFARRVDVSEALIRKYLKGSEPSLTKANQIAMRANCSLEWLATGCGYLYRQAEVVDMEAYKLA FQHVMSGTISQVEETQHRKLIAGYQYLRAHKKSDGFLDESAMATFLALHHENKTETSES >Mature_138_residues SFAQRLATLIGEESISGFARRVDVSEALIRKYLKGSEPSLTKANQIAMRANCSLEWLATGCGYLYRQAEVVDMEAYKLAF QHVMSGTISQVEETQHRKLIAGYQYLRAHKKSDGFLDESAMATFLALHHENKTETSES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15610; Mature: 15479
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFAQRLATLIGEESISGFARRVDVSEALIRKYLKGSEPSLTKANQIAMRANCSLEWLAT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHH GCGYLYRQAEVVDMEAYKLAFQHVMSGTISQVEETQHRKLIAGYQYLRAHKKSDGFLDES HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH AMATFLALHHENKTETSES HHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SFAQRLATLIGEESISGFARRVDVSEALIRKYLKGSEPSLTKANQIAMRANCSLEWLAT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHH GCGYLYRQAEVVDMEAYKLAFQHVMSGTISQVEETQHRKLIAGYQYLRAHKKSDGFLDES HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH AMATFLALHHENKTETSES HHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA