| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977410
Identifier: 156977410
GI number: 156977410
Start: 1376693
End: 1377517
Strand: Reverse
Name: 156977410
Synonym: VIBHAR_06197
Alternate gene names: NA
Gene position: 1377517-1376693 (Counterclockwise)
Preceding gene: 156977411
Following gene: 156977409
Centisome position: 62.5
GC content: 43.15
Gene sequence:
>825_bases ATGAGATCTCGACTGGTATTACTTGTTGCAATCGCTGCTTTGATAGTGGGCGCGTTAGGTGTTGTCGATTTATTCAAAAG CAATCCTCAACCGAAAGCTAATACTGAAGTGGTGGAGAAGCCAAACGAAGAATACGTTGCTGTTTGGGTGACCACAAAAG CTTATGAAAAAGGGCATGCTTTCGATGCTCAAGGTGTGGCTAAACAGCAATTTCCTTTGAGCGAAGCCTTGGTACTTGGT GTAAGGGAAGATGCTCAGATAAATTTTTCACCCTCAGTTTTGCTCAATAGAAGTCTTGAAAAAGGTGCTGTTGTGTTACC GGAATATCAAGTTAGTCCCGGACAAGCTGGTTATATCGATCTTCTGGTAACGGAAGGAATGACATTATATCCGCTTGAAG TAAGCGACCAGAACTTAATCAATGACTACATTCGTCCTGGCTCTTATATCGATATTCTCACGGTCAGCTCACCCAACGAT AACCTTGCTAAGAATATTGATAAACCTAAACGCTTTAGAGGTTTAAAAGCTTCAATGTTCTTAAAGCACGTCAAGGTCCT AAATATTGGTGGTGATGACGAAGGTGACAGCTCTGTTACCGCGCGTTCCCCAATTAATGAAGATGGGCTGACAACCGTGG TCATTGAGGTGAAACCGGACGACTTAGCAAAACTGGCTTTGGCACAACGAACCATGCATATCGAAATATACCGAAGTCAA ACCTACAACAAACCAGAGTACGCTGAAGTGCGCAATGTTATTGATAATTACACCGGCATCGAAGAACTACGTGGCAATGT CGTTGAACGAAGGGAGGCTCTTTAA
Upstream 100 bases:
>100_bases AGAAGGCATCCCATATGGGATAGCAATAAGTGTTGGATTTTACTTAGTCATTTTAACTCAAAATACGCCACACATTTAAT CCTCCAAGAATAGGGACAAT
Downstream 100 bases:
>100_bases TGGTAATACAATCTCGAATTAGCCGATCACTTTCAATATTCATCACGTCCGTCTTTCTTTGCTTGTTCTTTGTGACAAAA ACACACGCAGCTGATCGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MRSRLVLLVAIAALIVGALGVVDLFKSNPQPKANTEVVEKPNEEYVAVWVTTKAYEKGHAFDAQGVAKQQFPLSEALVLG VREDAQINFSPSVLLNRSLEKGAVVLPEYQVSPGQAGYIDLLVTEGMTLYPLEVSDQNLINDYIRPGSYIDILTVSSPND NLAKNIDKPKRFRGLKASMFLKHVKVLNIGGDDEGDSSVTARSPINEDGLTTVVIEVKPDDLAKLALAQRTMHIEIYRSQ TYNKPEYAEVRNVIDNYTGIEELRGNVVERREAL
Sequences:
>Translated_274_residues MRSRLVLLVAIAALIVGALGVVDLFKSNPQPKANTEVVEKPNEEYVAVWVTTKAYEKGHAFDAQGVAKQQFPLSEALVLG VREDAQINFSPSVLLNRSLEKGAVVLPEYQVSPGQAGYIDLLVTEGMTLYPLEVSDQNLINDYIRPGSYIDILTVSSPND NLAKNIDKPKRFRGLKASMFLKHVKVLNIGGDDEGDSSVTARSPINEDGLTTVVIEVKPDDLAKLALAQRTMHIEIYRSQ TYNKPEYAEVRNVIDNYTGIEELRGNVVERREAL >Mature_274_residues MRSRLVLLVAIAALIVGALGVVDLFKSNPQPKANTEVVEKPNEEYVAVWVTTKAYEKGHAFDAQGVAKQQFPLSEALVLG VREDAQINFSPSVLLNRSLEKGAVVLPEYQVSPGQAGYIDLLVTEGMTLYPLEVSDQNLINDYIRPGSYIDILTVSSPND NLAKNIDKPKRFRGLKASMFLKHVKVLNIGGDDEGDSSVTARSPINEDGLTTVVIEVKPDDLAKLALAQRTMHIEIYRSQ TYNKPEYAEVRNVIDNYTGIEELRGNVVERREAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30282; Mature: 30282
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSRLVLLVAIAALIVGALGVVDLFKSNPQPKANTEVVEKPNEEYVAVWVTTKAYEKGHA CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCEEEEEEEEECCCCCCC FDAQGVAKQQFPLSEALVLGVREDAQINFSPSVLLNRSLEKGAVVLPEYQVSPGQAGYID CCCCCCCHHCCCCCHHEEEECCCCCEECCCCHHEECCCCCCCEEEECCCCCCCCCCCEEE LLVTEGMTLYPLEVSDQNLINDYIRPGSYIDILTVSSPNDNLAKNIDKPKRFRGLKASMF EEEECCCEEEEEECCCCHHHHHHCCCCCEEEEEEECCCCCHHHHCCCCHHHHCCCHHHHH LKHVKVLNIGGDDEGDSSVTARSPINEDGLTTVVIEVKPDDLAKLALAQRTMHIEIYRSQ HHEEEEEECCCCCCCCCCEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHEEEEEEEECC TYNKPEYAEVRNVIDNYTGIEELRGNVVERREAL CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MRSRLVLLVAIAALIVGALGVVDLFKSNPQPKANTEVVEKPNEEYVAVWVTTKAYEKGHA CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCEEEEEEEEECCCCCCC FDAQGVAKQQFPLSEALVLGVREDAQINFSPSVLLNRSLEKGAVVLPEYQVSPGQAGYID CCCCCCCHHCCCCCHHEEEECCCCCEECCCCHHEECCCCCCCEEEECCCCCCCCCCCEEE LLVTEGMTLYPLEVSDQNLINDYIRPGSYIDILTVSSPNDNLAKNIDKPKRFRGLKASMF EEEECCCEEEEEECCCCHHHHHHCCCCCEEEEEEECCCCCHHHHCCCCHHHHCCCHHHHH LKHVKVLNIGGDDEGDSSVTARSPINEDGLTTVVIEVKPDDLAKLALAQRTMHIEIYRSQ HHEEEEEECCCCCCCCCCEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHEEEEEEEECC TYNKPEYAEVRNVIDNYTGIEELRGNVVERREAL CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA