Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156977407

Identifier: 156977407

GI number: 156977407

Start: 1373606

End: 1374847

Strand: Reverse

Name: 156977407

Synonym: VIBHAR_06194

Alternate gene names: NA

Gene position: 1374847-1373606 (Counterclockwise)

Preceding gene: 156977408

Following gene: 156977406

Centisome position: 62.38

GC content: 44.77

Gene sequence:

>1242_bases
ATGTTTGATCTGACGAAAGCCCTAACGACCAAGGTAAAGCCTTCACCATCTTCAGCGACAGGGGTCGCTGGTTGTACACT
ATTTTATCAATCACAAGAGTGTTTGAACCTAGTTCAAGAAGTGTTCCGCTTTGAAGGCTGGAATGATCCTGAGTGCGTAA
AAGCGAACTCGGGTTCAACCAAGCTCACAGAGCAACAAAGTAGTCACATCGTCATCCTTGAGCTGAATGAATCCCGCAGC
GTTGTTGAAGATGCTAAAGCGTTTGCCAGCAAAGTGCCAACTCATAAAGCGGTGGTAGTAATTGGCAAGGAAGACGCGAT
CTCGACGCTTCGTTCTCTCAAAGAAATGGGCTTTTATTACGTTTTTTGGCCAGTCAATAAACAAGAGTTTGCGGACTTCT
TGAATCATGTGGACAAAAACCTCAAGACATTTTCTGGCGTAAGTCAGAAGCGTAAAGCAAAACGTGTCGCGGTTGTTGGT
TCGAAAGGTGGGGTTGGAGCATCCTTCATTACTACCGAGTTAAGTTCACTGCTCTCTACTCAAGGTAGCGATACGATTCT
TGTCGACCATCAATATGCGGACACCAATATCGATGTTCTGCTGGGACTAAAAGACTTTAAATCCCGTGCTATAGACGAGT
TCACTGCGCCATTGCATGAGATGGATGAGGAAGGGGCATTGAGCTACCTGTTCAATGCACGAAAAAATCTACGTGTGTTG
GCGATTGATGGCGATATGAGCCAGAACGATATCCTCAACTACAACCAAACGCTTTGTGAGCTATTAGCTCGTAATACCAA
CTTCATCATTGAAGATTTTTCTGGTGGTGTTGATTTTAAAGTTGAACCTCAGCTGTTGGTGGAAAATTTTGATGTGGTTG
TGTTGGTGCTTGATGCTTCAGTGTCGTCAACAAGAAGCGCAAAGCGACTGTTTGAAAAAATGGCCAACTTGCAGCTTACG
CTATCGTCTCGTACTCGAGTCATCACCGTGGTGAACTACCATCGCCCAGAAAATGCTTATGTACTACAAAAGCCCGATCT
ACGTAAATACTTAGGCGCGTCTGTCGATCTGGAAGTCGACTATTGCAAATCATTATCGCACATCATTATCGATGGCAAGC
GAGCACACAAACATGATCGTAACATCAGTCGTTCTCTGGAACAGCTGGTGAAGTTGATCAATGGTCAGCCTGTGACTCAA
AAGGGCATGGTTTCTTGGTTGAAAAGGGTGCGTGTTAAATGA

Upstream 100 bases:

>100_bases
CAGCAAAGTTTCAGGCTCGAATTGGACAACCAGATTGTTTTGTCGAATCGATGCGTTTAAAGCAAGTATCCGATAAGTCT
CGATTGATAGGTGAATAATC

Downstream 100 bases:

>100_bases
GTTCTAACAAAGACTTATACCTCGCGTTTCGTGGTCAGATATTCGAAGCGCTAGACGCCGAAGCGGTTCAGAAAATGAGC
CGCCGTGACCTCGAATCACA

Product: hypothetical protein

Products: NA

Alternate protein names: Chromosome Partitioning ATPase; Type II Secretion System Protein Z

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MFDLTKALTTKVKPSPSSATGVAGCTLFYQSQECLNLVQEVFRFEGWNDPECVKANSGSTKLTEQQSSHIVILELNESRS
VVEDAKAFASKVPTHKAVVVIGKEDAISTLRSLKEMGFYYVFWPVNKQEFADFLNHVDKNLKTFSGVSQKRKAKRVAVVG
SKGGVGASFITTELSSLLSTQGSDTILVDHQYADTNIDVLLGLKDFKSRAIDEFTAPLHEMDEEGALSYLFNARKNLRVL
AIDGDMSQNDILNYNQTLCELLARNTNFIIEDFSGGVDFKVEPQLLVENFDVVVLVLDASVSSTRSAKRLFEKMANLQLT
LSSRTRVITVVNYHRPENAYVLQKPDLRKYLGASVDLEVDYCKSLSHIIIDGKRAHKHDRNISRSLEQLVKLINGQPVTQ
KGMVSWLKRVRVK

Sequences:

>Translated_413_residues
MFDLTKALTTKVKPSPSSATGVAGCTLFYQSQECLNLVQEVFRFEGWNDPECVKANSGSTKLTEQQSSHIVILELNESRS
VVEDAKAFASKVPTHKAVVVIGKEDAISTLRSLKEMGFYYVFWPVNKQEFADFLNHVDKNLKTFSGVSQKRKAKRVAVVG
SKGGVGASFITTELSSLLSTQGSDTILVDHQYADTNIDVLLGLKDFKSRAIDEFTAPLHEMDEEGALSYLFNARKNLRVL
AIDGDMSQNDILNYNQTLCELLARNTNFIIEDFSGGVDFKVEPQLLVENFDVVVLVLDASVSSTRSAKRLFEKMANLQLT
LSSRTRVITVVNYHRPENAYVLQKPDLRKYLGASVDLEVDYCKSLSHIIIDGKRAHKHDRNISRSLEQLVKLINGQPVTQ
KGMVSWLKRVRVK
>Mature_413_residues
MFDLTKALTTKVKPSPSSATGVAGCTLFYQSQECLNLVQEVFRFEGWNDPECVKANSGSTKLTEQQSSHIVILELNESRS
VVEDAKAFASKVPTHKAVVVIGKEDAISTLRSLKEMGFYYVFWPVNKQEFADFLNHVDKNLKTFSGVSQKRKAKRVAVVG
SKGGVGASFITTELSSLLSTQGSDTILVDHQYADTNIDVLLGLKDFKSRAIDEFTAPLHEMDEEGALSYLFNARKNLRVL
AIDGDMSQNDILNYNQTLCELLARNTNFIIEDFSGGVDFKVEPQLLVENFDVVVLVLDASVSSTRSAKRLFEKMANLQLT
LSSRTRVITVVNYHRPENAYVLQKPDLRKYLGASVDLEVDYCKSLSHIIIDGKRAHKHDRNISRSLEQLVKLINGQPVTQ
KGMVSWLKRVRVK

Specific function: Unknown

COG id: COG2894

COG function: function code D; Septum formation inhibitor-activating ATPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46175; Mature: 46175

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDLTKALTTKVKPSPSSATGVAGCTLFYQSQECLNLVQEVFRFEGWNDPECVKANSGST
CCCCHHHHHCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCCEECCCCCC
KLTEQQSSHIVILELNESRSVVEDAKAFASKVPTHKAVVVIGKEDAISTLRSLKEMGFYY
EEECCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHCCEEE
VFWPVNKQEFADFLNHVDKNLKTFSGVSQKRKAKRVAVVGSKGGVGASFITTELSSLLST
EEEECCHHHHHHHHHHHHHHHHHHHCHHHHHHHCEEEEEECCCCCCHHHHHHHHHHHHHC
QGSDTILVDHQYADTNIDVLLGLKDFKSRAIDEFTAPLHEMDEEGALSYLFNARKNLRVL
CCCCEEEEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEE
AIDGDMSQNDILNYNQTLCELLARNTNFIIEDFSGGVDFKVEPQLLVENFDVVVLVLDAS
EEECCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCEEECHHHHCCCCCEEEEEEECC
VSSTRSAKRLFEKMANLQLTLSSRTRVITVVNYHRPENAYVLQKPDLRKYLGASVDLEVD
CCHHHHHHHHHHHHHCEEEEECCCCEEEEEEEEECCCCCEEEECCCHHHHCCCCCEEEHH
YCKSLSHIIIDGKRAHKHDRNISRSLEQLVKLINGQPVTQKGMVSWLKRVRVK
HHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MFDLTKALTTKVKPSPSSATGVAGCTLFYQSQECLNLVQEVFRFEGWNDPECVKANSGST
CCCCHHHHHCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCCEECCCCCC
KLTEQQSSHIVILELNESRSVVEDAKAFASKVPTHKAVVVIGKEDAISTLRSLKEMGFYY
EEECCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHCCEEE
VFWPVNKQEFADFLNHVDKNLKTFSGVSQKRKAKRVAVVGSKGGVGASFITTELSSLLST
EEEECCHHHHHHHHHHHHHHHHHHHCHHHHHHHCEEEEEECCCCCCHHHHHHHHHHHHHC
QGSDTILVDHQYADTNIDVLLGLKDFKSRAIDEFTAPLHEMDEEGALSYLFNARKNLRVL
CCCCEEEEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEE
AIDGDMSQNDILNYNQTLCELLARNTNFIIEDFSGGVDFKVEPQLLVENFDVVVLVLDAS
EEECCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCEEECHHHHCCCCCEEEEEEECC
VSSTRSAKRLFEKMANLQLTLSSRTRVITVVNYHRPENAYVLQKPDLRKYLGASVDLEVD
CCHHHHHHHHHHHHHCEEEEECCCCEEEEEEEEECCCCCEEEECCCHHHHCCCCCEEEHH
YCKSLSHIIIDGKRAHKHDRNISRSLEQLVKLINGQPVTQKGMVSWLKRVRVK
HHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA