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The map label for this gene is gspE [C]

Identifier: 156977406

GI number: 156977406

Start: 1372338

End: 1373609

Strand: Reverse

Name: gspE [C]

Synonym: VIBHAR_06193

Alternate gene names: 156977406

Gene position: 1373609-1372338 (Counterclockwise)

Preceding gene: 156977407

Following gene: 156977405

Centisome position: 62.32

GC content: 46.38

Gene sequence:

>1272_bases
ATGAGTTCTAACAAAGACTTATACCTCGCGTTTCGTGGTCAGATATTCGAAGCGCTAGACGCCGAAGCGGTTCAGAAAAT
GAGCCGCCGTGACCTCGAATCACAAATACAAGCCGCAGTTGATCTGCTAGCCAATAATTACCAGCGTCCGATTACGTCTA
TGACGAAGTCTGGGTTGGTGAAAAGTCTGATTGATGAGCTGCTTGGTTTGGGGCCATTACAACCATTAGTGGAAGATCAG
TCGATCTCAGACATCATGGTGAACGGGCCAAATAACATCTTCTTCGAACGACACGGTAAGGTACAAAAATCAGAAGTCTC
GTTTGTCAATGAAGAGCAGTTATTGGCGATCGCAAAACGTATTGCATCGCGTGTTGGCAGACGTGTGGATGAGTTGTCTC
CAACAGTTGATGCAAGGCTTGAAGACGGCAGTCGTGTAAACATAGTTATTCCACCGATTGCTTTGGACGGAACCTCAATT
TCTATCCGTAAGTTCAGAGAACAGAACATTGGCTTCGAGGATTTAATTGGTTTTGGCTCTATGTCTCCAGACATGGCAAG
AGTTTTGATGATCGCTTCCCGCTGTCGAATAAATATTCTTATTTCAGGCGGCACCGGCTCCGGCAAAACCACACTACTCA
ATGCACTATCTCAGTATATTGCAGAAGATGAGCGTATTATAACGATTGAGGATGCAGCTGAGCTTCGTTTGCAACAACCA
AACTTGGTTCGATTAGAAACGCGAACCTCCAGCGTTGAACAAACTGGTGCGGTGAACCAGCGTGATTTGGTTATCAATGC
GCTGCGTATGCGCCCAGATCGAATCATTCTTGGTGAGTGTCGTGGTTCTGAAGCATTTGAAATGCTGCAAGCGATGAACA
CCGGCCACGATGGTTCAATGTCGACGTTGCACGCCAATACACCACGTGATGCGATTGCTCGTGTTGAATCCATGGTCATG
ATGGCGAACCTAAACCAACCTCTTGATGCAATTCGAAGAACAATCGTCAGTGCGGTGCAAATGATCGTGCAGGTTAACCG
ACTGCGCGATGGCTCTCGTAAGATAACCAGTATATCTGAAATCGTTGGTTTAGAGGGCGATAGCGTAGTGATGGAAGAGA
TCTACCGTTTCCGTTACGACGATACCCACTTTGGGGAAACCGTTAAAGGTGACTTTGTAACGAGTGGCATCATGCAACGA
TCTGAGCTTGTGAAAAAAGCCCAATTCTTCGGGCTTTATGATGAGCTTATGGCATCGTTTAAGGGGATATAG

Upstream 100 bases:

>100_bases
GTAACATCAGTCGTTCTCTGGAACAGCTGGTGAAGTTGATCAATGGTCAGCCTGTGACTCAAAAGGGCATGGTTTCTTGG
TTGAAAAGGGTGCGTGTTAA

Downstream 100 bases:

>100_bases
CATGCTTTGGCTCTCGCTTATCCTCTTTGCCTTCGTTCTGCTTTTAGTCCGAGATTCAAAGGTTAAAAAGGTCGATCAGT
TTTTCAATATTGAAGAAGTT

Product: flp pilus assembly ATPase CpaF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 422

Protein sequence:

>423_residues
MSSNKDLYLAFRGQIFEALDAEAVQKMSRRDLESQIQAAVDLLANNYQRPITSMTKSGLVKSLIDELLGLGPLQPLVEDQ
SISDIMVNGPNNIFFERHGKVQKSEVSFVNEEQLLAIAKRIASRVGRRVDELSPTVDARLEDGSRVNIVIPPIALDGTSI
SIRKFREQNIGFEDLIGFGSMSPDMARVLMIASRCRINILISGGTGSGKTTLLNALSQYIAEDERIITIEDAAELRLQQP
NLVRLETRTSSVEQTGAVNQRDLVINALRMRPDRIILGECRGSEAFEMLQAMNTGHDGSMSTLHANTPRDAIARVESMVM
MANLNQPLDAIRRTIVSAVQMIVQVNRLRDGSRKITSISEIVGLEGDSVVMEEIYRFRYDDTHFGETVKGDFVTSGIMQR
SELVKKAQFFGLYDELMASFKGI

Sequences:

>Translated_423_residues
MSSNKDLYLAFRGQIFEALDAEAVQKMSRRDLESQIQAAVDLLANNYQRPITSMTKSGLVKSLIDELLGLGPLQPLVEDQ
SISDIMVNGPNNIFFERHGKVQKSEVSFVNEEQLLAIAKRIASRVGRRVDELSPTVDARLEDGSRVNIVIPPIALDGTSI
SIRKFREQNIGFEDLIGFGSMSPDMARVLMIASRCRINILISGGTGSGKTTLLNALSQYIAEDERIITIEDAAELRLQQP
NLVRLETRTSSVEQTGAVNQRDLVINALRMRPDRIILGECRGSEAFEMLQAMNTGHDGSMSTLHANTPRDAIARVESMVM
MANLNQPLDAIRRTIVSAVQMIVQVNRLRDGSRKITSISEIVGLEGDSVVMEEIYRFRYDDTHFGETVKGDFVTSGIMQR
SELVKKAQFFGLYDELMASFKGI
>Mature_422_residues
SSNKDLYLAFRGQIFEALDAEAVQKMSRRDLESQIQAAVDLLANNYQRPITSMTKSGLVKSLIDELLGLGPLQPLVEDQS
ISDIMVNGPNNIFFERHGKVQKSEVSFVNEEQLLAIAKRIASRVGRRVDELSPTVDARLEDGSRVNIVIPPIALDGTSIS
IRKFREQNIGFEDLIGFGSMSPDMARVLMIASRCRINILISGGTGSGKTTLLNALSQYIAEDERIITIEDAAELRLQQPN
LVRLETRTSSVEQTGAVNQRDLVINALRMRPDRIILGECRGSEAFEMLQAMNTGHDGSMSTLHANTPRDAIARVESMVMM
ANLNQPLDAIRRTIVSAVQMIVQVNRLRDGSRKITSISEIVGLEGDSVVMEEIYRFRYDDTHFGETVKGDFVTSGIMQRS
ELVKKAQFFGLYDELMASFKGI

Specific function: Involved In A General Secretion Pathway (Gsp) For The Export Of Proteins (By Similarity). [C]

COG id: COG4962

COG function: function code U; Flp pilus assembly protein, ATPase CpaF

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022399
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 47003; Mature: 46871

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: PS00227 TUBULIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSNKDLYLAFRGQIFEALDAEAVQKMSRRDLESQIQAAVDLLANNYQRPITSMTKSGLV
CCCCCCEEEEEHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
KSLIDELLGLGPLQPLVEDQSISDIMVNGPNNIFFERHGKVQKSEVSFVNEEQLLAIAKR
HHHHHHHHCCCCCCHHHCCCCCCEEEEECCCCEEEECCCCCCHHHHHHCCHHHHHHHHHH
IASRVGRRVDELSPTVDARLEDGSRVNIVIPPIALDGTSISIRKFREQNIGFEDLIGFGS
HHHHHHHHHHHCCCCHHCCCCCCCEEEEEECCEEECCCCHHHHHHHHHCCCHHHHHCCCC
MSPDMARVLMIASRCRINILISGGTGSGKTTLLNALSQYIAEDERIITIEDAAELRLQQP
CCHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECHHHHEECCC
NLVRLETRTSSVEQTGAVNQRDLVINALRMRPDRIILGECRGSEAFEMLQAMNTGHDGSM
CEEEEECCCCHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCCC
STLHANTPRDAIARVESMVMMANLNQPLDAIRRTIVSAVQMIVQVNRLRDGSRKITSISE
CEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
IVGLEGDSVVMEEIYRFRYDDTHFGETVKGDFVTSGIMQRSELVKKAQFFGLYDELMASF
HHCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KGI
CCC
>Mature Secondary Structure 
SSNKDLYLAFRGQIFEALDAEAVQKMSRRDLESQIQAAVDLLANNYQRPITSMTKSGLV
CCCCCEEEEEHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
KSLIDELLGLGPLQPLVEDQSISDIMVNGPNNIFFERHGKVQKSEVSFVNEEQLLAIAKR
HHHHHHHHCCCCCCHHHCCCCCCEEEEECCCCEEEECCCCCCHHHHHHCCHHHHHHHHHH
IASRVGRRVDELSPTVDARLEDGSRVNIVIPPIALDGTSISIRKFREQNIGFEDLIGFGS
HHHHHHHHHHHCCCCHHCCCCCCCEEEEEECCEEECCCCHHHHHHHHHCCCHHHHHCCCC
MSPDMARVLMIASRCRINILISGGTGSGKTTLLNALSQYIAEDERIITIEDAAELRLQQP
CCHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECHHHHEECCC
NLVRLETRTSSVEQTGAVNQRDLVINALRMRPDRIILGECRGSEAFEMLQAMNTGHDGSM
CEEEEECCCCHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCCC
STLHANTPRDAIARVESMVMMANLNQPLDAIRRTIVSAVQMIVQVNRLRDGSRKITSISE
CEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
IVGLEGDSVVMEEIYRFRYDDTHFGETVKGDFVTSGIMQRSELVKKAQFFGLYDELMASF
HHCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KGI
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12218036; 9634230 [H]