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The map label for this gene is 156977404

Identifier: 156977404

GI number: 156977404

Start: 1370595

End: 1371437

Strand: Reverse

Name: 156977404

Synonym: VIBHAR_06191

Alternate gene names: NA

Gene position: 1371437-1370595 (Counterclockwise)

Preceding gene: 156977405

Following gene: 156977403

Centisome position: 62.22

GC content: 42.94

Gene sequence:

>843_bases
ATGATGTTATTGACTGCTCTTATTGTGCTGTTCGTATCGTTACTTTTTCTGATATTCGATTCACTTCGTACAGAACAAAG
ACGCAAGAAGATTGCGTTATATGTAGGGGGGAATGCACATCGCTCGCCATCTCGTGTTAATCGATTTTTTGTTCGTTTTG
GTAAAGAACACCGCCAAGAATTAGAACAGAAAATGATTGAGGCAGGCTACTACAACACGGAGTGGGCGAAGTTTTACTTC
CCTGCCAAATTGTTGGTACTGGGTTTGGTGTCAGGGTTTGTGTTGCTGTCGGACATGACACAGAGCAACCAACTTATCGT
CATTACTTTCACGCTTATTGCTGTGATTGTTGGCCCTGACTCGTTGCTTCAAATGCGCCGCAAGATATTGATTAGAAAGA
CGTCTGCTCAACTACCATATCTGTTAGACATGATGTCCGTTTGTGTTCAAACCGGTATGACGATAGAGGCTGCATTGGTT
TACCTAGGAAAAGAATTGGCCGAGTTTGATTCAGACCTTTGTTATCAAATCAAACGCACATCGGATTCCGCAAAAATACA
TGGACTAGAAAAGGCGTTAAACGATCTTAGTGAGCGCATACCAACGCCACCGATACGAAGCTTTGTGCTGACCATTATTC
AAAACCTGCAATACGGTACGTCTGTGGCTCAAGTATTGAGTGATCTCGCGGAGGACATGCGAAAAGTTCAAATTCTTACT
GTGGAAGAAAAGGTCGGAAAACTTTCTGCGAAGATGAGTGTGCCTTTGATCCTTTTCATCATGTTTCCAATCGTGATTCT
GATTCTCGCACCGGGAATCATGCAGATGACGCTAAATATATAG

Upstream 100 bases:

>100_bases
TTTTGTATGACCCATCTGGTCGACTCGTGCTGTTTTATGTTCTTGGCAGTGAGTTCTTCGGGTTATTTATTGTTTGGCTG
TTGGTAAGAGGTGTGCGCGC

Downstream 100 bases:

>100_bases
AGGAATAACCAGTGATTGGAAAACGTATTTCTATTGTATTGCTTACGTTGGGCATTTTGGCAGGCTGTCAGTCGACTTCT
TCGCAACAGAGCCAGGCACA

Product: hypothetical protein

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadC; Type II/IV Secretion System Protein TadC Subfamily; Type II Secretion System F Domain Protein; TadC Protein; Bipartite Nuclear Localization Signal Containing Protein; Tight Adherence Protein C; Bacterial Type II Secretion System Protein F Domain; Flp Pilus Assembly Protein; TadC Family Type II/IV Secretion System Protein; Pilus Assembly Protein; Type II Secretion System; TadC Component Of Type IV Pilus; Type II Secretion System F Domain-Containing Protein; Tight Adherence TadC-Related Transmembrane Protein; TadC Pilus Assembly Protein; Tyrosine Phenol-Lyase; Bacterial Type II Secretion System Protein; Fimbriae-Related Membrane Protein; Pilus Assembly Protein TadC; Bacterial Type II Secretion System Protein F; Components Of Type IV Pilus TadC; Integral Membrane Protein; Tad Secretion System Secretion Accessory Protein; Component Of Type IV Pilus; Component Of Pilus Protein; Tight Adherance Operon Protein C; Tight Adherance Operon Protein; Components Of Type IV Pilus

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MMLLTALIVLFVSLLFLIFDSLRTEQRRKKIALYVGGNAHRSPSRVNRFFVRFGKEHRQELEQKMIEAGYYNTEWAKFYF
PAKLLVLGLVSGFVLLSDMTQSNQLIVITFTLIAVIVGPDSLLQMRRKILIRKTSAQLPYLLDMMSVCVQTGMTIEAALV
YLGKELAEFDSDLCYQIKRTSDSAKIHGLEKALNDLSERIPTPPIRSFVLTIIQNLQYGTSVAQVLSDLAEDMRKVQILT
VEEKVGKLSAKMSVPLILFIMFPIVILILAPGIMQMTLNI

Sequences:

>Translated_280_residues
MMLLTALIVLFVSLLFLIFDSLRTEQRRKKIALYVGGNAHRSPSRVNRFFVRFGKEHRQELEQKMIEAGYYNTEWAKFYF
PAKLLVLGLVSGFVLLSDMTQSNQLIVITFTLIAVIVGPDSLLQMRRKILIRKTSAQLPYLLDMMSVCVQTGMTIEAALV
YLGKELAEFDSDLCYQIKRTSDSAKIHGLEKALNDLSERIPTPPIRSFVLTIIQNLQYGTSVAQVLSDLAEDMRKVQILT
VEEKVGKLSAKMSVPLILFIMFPIVILILAPGIMQMTLNI
>Mature_280_residues
MMLLTALIVLFVSLLFLIFDSLRTEQRRKKIALYVGGNAHRSPSRVNRFFVRFGKEHRQELEQKMIEAGYYNTEWAKFYF
PAKLLVLGLVSGFVLLSDMTQSNQLIVITFTLIAVIVGPDSLLQMRRKILIRKTSAQLPYLLDMMSVCVQTGMTIEAALV
YLGKELAEFDSDLCYQIKRTSDSAKIHGLEKALNDLSERIPTPPIRSFVLTIIQNLQYGTSVAQVLSDLAEDMRKVQILT
VEEKVGKLSAKMSVPLILFIMFPIVILILAPGIMQMTLNI

Specific function: Unknown

COG id: COG2064

COG function: function code NU; Flp pilus assembly protein TadC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31693; Mature: 31693

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLLTALIVLFVSLLFLIFDSLRTEQRRKKIALYVGGNAHRSPSRVNRFFVRFGKEHRQE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
LEQKMIEAGYYNTEWAKFYFPAKLLVLGLVSGFVLLSDMTQSNQLIVITFTLIAVIVGPD
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCH
SLLQMRRKILIRKTSAQLPYLLDMMSVCVQTGMTIEAALVYLGKELAEFDSDLCYQIKRT
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
SDSAKIHGLEKALNDLSERIPTPPIRSFVLTIIQNLQYGTSVAQVLSDLAEDMRKVQILT
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEE
VEEKVGKLSAKMSVPLILFIMFPIVILILAPGIMQMTLNI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
>Mature Secondary Structure
MMLLTALIVLFVSLLFLIFDSLRTEQRRKKIALYVGGNAHRSPSRVNRFFVRFGKEHRQE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
LEQKMIEAGYYNTEWAKFYFPAKLLVLGLVSGFVLLSDMTQSNQLIVITFTLIAVIVGPD
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCH
SLLQMRRKILIRKTSAQLPYLLDMMSVCVQTGMTIEAALVYLGKELAEFDSDLCYQIKRT
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
SDSAKIHGLEKALNDLSERIPTPPIRSFVLTIIQNLQYGTSVAQVLSDLAEDMRKVQILT
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEE
VEEKVGKLSAKMSVPLILFIMFPIVILILAPGIMQMTLNI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA