Click here to switch to the map view.

The map label for this gene is 156977405

Identifier: 156977405

GI number: 156977405

Start: 1371434

End: 1372336

Strand: Reverse

Name: 156977405

Synonym: VIBHAR_06192

Alternate gene names: NA

Gene position: 1372336-1371434 (Counterclockwise)

Preceding gene: 156977406

Following gene: 156977404

Centisome position: 62.27

GC content: 44.41

Gene sequence:

>903_bases
ATGCTTTGGCTCTCGCTTATCCTCTTTGCCTTCGTTCTGCTTTTAGTCCGAGATTCAAAGGTTAAAAAGGTCGATCAGTT
TTTCAATATTGAAGAAGTTGAAGCGGAAAACTTCAACGCAATCAACGTTAAATCTCTGGTACGCAAACAAAGCTGGCAGA
AGTTTAAAGAGTCGATCTCGCCAACTCTTAAAGTTTTGGGACCGCGATCGTCTCTTTATATCGCTCTGTACATTACAGGT
AGCCTTATTGTCTCTTGGTACTTTGTCGTTAAGTTGCTCTTGATGTCCAGCATCTGGCTAACGCTAGGGTTGTCAGTGTT
ACTAACCCTGTTTGGTTACCGGTACTTGGTGACAAGAAGACGCAGAGACTTTGAAAACACTTTTCCAGACGCTCTGAATA
TTCTCATGAGTGCGGTTACGGCTGGTGACAGTTTAATGCAAGCCATCAGCTACGTTGGCGACGTGATGGATAACTCGATT
GGTCGTGAATTCAAGTTGATGGGAGACCGACTGAAATTAGGTGAGTCTCCTGAGGTTGTATTGCAGCGTTCGTGTAAAAA
CTACCCATATCCGGAATTTCTGTTCTTTACCGTCACACTAAGAGCAAACATTGCTCGAGGCGGCCAGTTAAAAGGCGTGT
TAGCAAGGCTTATTCGCGTGCTCGTAGATGCCAGAACGCTAGAGAAAAAGAAAATGGCGATGACGTCGGAAGCAAGAATC
TCGGCCAAGATCGTTGCAGCGATTCCGTTGATTTTCATGATCATCCTTAACTACGTAAACCCAGATAACGTGAATTTTGT
TTTGTATGACCCATCTGGTCGACTCGTGCTGTTTTATGTTCTTGGCAGTGAGTTCTTCGGGTTATTTATTGTTTGGCTGT
TGGTAAGAGGTGTGCGCGCATGA

Upstream 100 bases:

>100_bases
TTTGTAACGAGTGGCATCATGCAACGATCTGAGCTTGTGAAAAAAGCCCAATTCTTCGGGCTTTATGATGAGCTTATGGC
ATCGTTTAAGGGGATATAGC

Downstream 100 bases:

>100_bases
TGTTATTGACTGCTCTTATTGTGCTGTTCGTATCGTTACTTTTTCTGATATTCGATTCACTTCGTACAGAACAAAGACGC
AAGAAGATTGCGTTATATGT

Product: Flp pilus assembly protein TadB

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadB; Pilus Assembly Protein; TadB Protein; Tight Adherence Protein B; Type II Secretion System F Domain-Containing Protein; Bacterial Type II Secretion System Protein F; Bacterial Type II Secretion System Protein F Domain; Pilus Assembly Protein TadB; Type II Secretion System; MaoC Protein; Flp Pilus Assembly Protein Tadb; Type II Secretion System F Domain Protein; Tight Adherance Operon Protein B; Flp Pilus Assembly Protein; Component Of Type IV Pilus; Type II Secretion System Protein F; Type II Secretion System F Domain; Tight Adherance Operon Protein; Components Of Type IV Pilus

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MLWLSLILFAFVLLLVRDSKVKKVDQFFNIEEVEAENFNAINVKSLVRKQSWQKFKESISPTLKVLGPRSSLYIALYITG
SLIVSWYFVVKLLLMSSIWLTLGLSVLLTLFGYRYLVTRRRRDFENTFPDALNILMSAVTAGDSLMQAISYVGDVMDNSI
GREFKLMGDRLKLGESPEVVLQRSCKNYPYPEFLFFTVTLRANIARGGQLKGVLARLIRVLVDARTLEKKKMAMTSEARI
SAKIVAAIPLIFMIILNYVNPDNVNFVLYDPSGRLVLFYVLGSEFFGLFIVWLLVRGVRA

Sequences:

>Translated_300_residues
MLWLSLILFAFVLLLVRDSKVKKVDQFFNIEEVEAENFNAINVKSLVRKQSWQKFKESISPTLKVLGPRSSLYIALYITG
SLIVSWYFVVKLLLMSSIWLTLGLSVLLTLFGYRYLVTRRRRDFENTFPDALNILMSAVTAGDSLMQAISYVGDVMDNSI
GREFKLMGDRLKLGESPEVVLQRSCKNYPYPEFLFFTVTLRANIARGGQLKGVLARLIRVLVDARTLEKKKMAMTSEARI
SAKIVAAIPLIFMIILNYVNPDNVNFVLYDPSGRLVLFYVLGSEFFGLFIVWLLVRGVRA
>Mature_300_residues
MLWLSLILFAFVLLLVRDSKVKKVDQFFNIEEVEAENFNAINVKSLVRKQSWQKFKESISPTLKVLGPRSSLYIALYITG
SLIVSWYFVVKLLLMSSIWLTLGLSVLLTLFGYRYLVTRRRRDFENTFPDALNILMSAVTAGDSLMQAISYVGDVMDNSI
GREFKLMGDRLKLGESPEVVLQRSCKNYPYPEFLFFTVTLRANIARGGQLKGVLARLIRVLVDARTLEKKKMAMTSEARI
SAKIVAAIPLIFMIILNYVNPDNVNFVLYDPSGRLVLFYVLGSEFFGLFIVWLLVRGVRA

Specific function: Unknown

COG id: COG4965

COG function: function code U; Flp pilus assembly protein TadB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34194; Mature: 34194

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLWLSLILFAFVLLLVRDSKVKKVDQFFNIEEVEAENFNAINVKSLVRKQSWQKFKESIS
CHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCC
PTLKVLGPRSSLYIALYITGSLIVSWYFVVKLLLMSSIWLTLGLSVLLTLFGYRYLVTRR
CHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRDFENTFPDALNILMSAVTAGDSLMQAISYVGDVMDNSIGREFKLMGDRLKLGESPEVV
HHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHCCHHHCCCCCHHHH
LQRSCKNYPYPEFLFFTVTLRANIARGGQLKGVLARLIRVLVDARTLEKKKMAMTSEARI
HHHHHCCCCCCCCEEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAKIVAAIPLIFMIILNYVNPDNVNFVLYDPSGRLVLFYVLGSEFFGLFIVWLLVRGVRA
HHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLWLSLILFAFVLLLVRDSKVKKVDQFFNIEEVEAENFNAINVKSLVRKQSWQKFKESIS
CHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCC
PTLKVLGPRSSLYIALYITGSLIVSWYFVVKLLLMSSIWLTLGLSVLLTLFGYRYLVTRR
CHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRDFENTFPDALNILMSAVTAGDSLMQAISYVGDVMDNSIGREFKLMGDRLKLGESPEVV
HHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHCCHHHCCCCCHHHH
LQRSCKNYPYPEFLFFTVTLRANIARGGQLKGVLARLIRVLVDARTLEKKKMAMTSEARI
HHHHHCCCCCCCCEEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAKIVAAIPLIFMIILNYVNPDNVNFVLYDPSGRLVLFYVLGSEFFGLFIVWLLVRGVRA
HHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA