Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156977330

Identifier: 156977330

GI number: 156977330

Start: 1278382

End: 1278891

Strand: Direct

Name: 156977330

Synonym: VIBHAR_06116

Alternate gene names: NA

Gene position: 1278382-1278891 (Clockwise)

Preceding gene: 156977329

Following gene: 156977331

Centisome position: 58.0

GC content: 47.84

Gene sequence:

>510_bases
GTGGGGATCCCTCAGAACCAAGGCGCCATTTATACCAACGTTGGTGACCTAGATAACCAAGGTATTACTGCTTACTTAGG
TTATGCAATTGCTGATGTCTCTGCTCGCTTGAGCTACAACCAATCTCGTCCAGAACTTAACGGTACTCCACTATCAGATG
AAGACTCAACGCTGGGCACATCTATCGGCGACACTTGGGCTCTTGACCTCATTTACCAACCAATGGAGTCACTGGAGTTT
GGCTGGAATGCTCGATTTGTTGAGCGCCTAACCGATGTAGCGAATCCAACCGTTCACCCAGAAAAGCCAGGCTATGGTGT
GCATGATGTTTACGCATATTGGATGCCTATTGCAGACGAAGAGTTATCTCTGACGCTGTCTGTTAAGAATGTATTCGACA
AATACTACTTTGACCACGCATCGTACATGGCATACATCGGCAGTCCTGTCGCTCAAGGTTATGCAAGCCCAGGACGAGAC
TTCCGCTTTAACGTCACTTACGCGTTCTAG

Upstream 100 bases:

>100_bases
GTTGATAGGAAGAGAAGCTTACTCATTTAGCGTGAAGGATCTGGCCTTAGCCGTAGGAGGCCTCAAAGCGATAAGTGCGG
CAGAGTTCCGGTGAAAAGAT

Downstream 100 bases:

>100_bases
TATTGGTCGACAAAACAGCTTTTTATCGAACAATGCCAACTCAAAAGTCGGAGCGAATTGCTCCGATTTTTGGTATTTAG
CGGCGTATTTTGCTTTAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NB-Dependent Receptor Domain Protein; Enterobactin Receptor VctA; Outer Membrane Protein; NB Dependent Receptor; NB-Dependent Heme/Hemoglobin Receptor Family Protein; NB-Dependent Receptor Plug; Outer Membrane Receptor Protein; NB Dependent/Ligand-Gated Channel; NB-Dependent Haem/Haemoglobin Receptor; Iron-Regulated Outer Membrane Protein B; Iron-Regulated Outer Membrane Protein FetA; Fe-Regulated Protein B; Nb-Dependent Receptor; Ferric Enterobactin Receptor; Enterobactin Receptor; CirA Protein; Fe Transport Outer Membrane Receptor Protein

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MGIPQNQGAIYTNVGDLDNQGITAYLGYAIADVSARLSYNQSRPELNGTPLSDEDSTLGTSIGDTWALDLIYQPMESLEF
GWNARFVERLTDVANPTVHPEKPGYGVHDVYAYWMPIADEELSLTLSVKNVFDKYYFDHASYMAYIGSPVAQGYASPGRD
FRFNVTYAF

Sequences:

>Translated_169_residues
MGIPQNQGAIYTNVGDLDNQGITAYLGYAIADVSARLSYNQSRPELNGTPLSDEDSTLGTSIGDTWALDLIYQPMESLEF
GWNARFVERLTDVANPTVHPEKPGYGVHDVYAYWMPIADEELSLTLSVKNVFDKYYFDHASYMAYIGSPVAQGYASPGRD
FRFNVTYAF
>Mature_168_residues
GIPQNQGAIYTNVGDLDNQGITAYLGYAIADVSARLSYNQSRPELNGTPLSDEDSTLGTSIGDTWALDLIYQPMESLEFG
WNARFVERLTDVANPTVHPEKPGYGVHDVYAYWMPIADEELSLTLSVKNVFDKYYFDHASYMAYIGSPVAQGYASPGRDF
RFNVTYAF

Specific function: Unknown

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18833; Mature: 18702

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: PS01156 TONB_DEPENDENT_REC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIPQNQGAIYTNVGDLDNQGITAYLGYAIADVSARLSYNQSRPELNGTPLSDEDSTLGT
CCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
SIGDTWALDLIYQPMESLEFGWNARFVERLTDVANPTVHPEKPGYGVHDVYAYWMPIADE
CCCCHHHHHHHHHCHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHEECCCCCC
ELSLTLSVKNVFDKYYFDHASYMAYIGSPVAQGYASPGRDFRFNVTYAF
CEEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCEEEEEEEEC
>Mature Secondary Structure 
GIPQNQGAIYTNVGDLDNQGITAYLGYAIADVSARLSYNQSRPELNGTPLSDEDSTLGT
CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
SIGDTWALDLIYQPMESLEFGWNARFVERLTDVANPTVHPEKPGYGVHDVYAYWMPIADE
CCCCHHHHHHHHHCHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHEECCCCCC
ELSLTLSVKNVFDKYYFDHASYMAYIGSPVAQGYASPGRDFRFNVTYAF
CEEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA