| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977331
Identifier: 156977331
GI number: 156977331
Start: 1279035
End: 1281380
Strand: Direct
Name: 156977331
Synonym: VIBHAR_06117
Alternate gene names: NA
Gene position: 1279035-1281380 (Clockwise)
Preceding gene: 156977330
Following gene: 156977332
Centisome position: 58.03
GC content: 46.33
Gene sequence:
>2346_bases TTGATTTTTATACTCTGCATCGCCACTTTATTCGCGGGCTGTGCAACTTACGCAGGGCTGAACTACGACCAACTGTTCGG CTCACAACAAGTACGTGAGCGAACGGCAACCATCGACACACCGCAAGCCGATTTCTTTCAACATGATGTTAAACCCATCG TTGATAACCGCTGTGTGGTCTGTCATGCCTGCTACGACGCCCCTTGTCAGTTAAAACTTTCTTCCGTAGAAGGCATAGAC CGTGGTGCTAGCAAGGCCTTGGTTTACGAAGGTACACGCTTGACCGCTGCTGCTCCAACTCGCTTATTTGAAGATGCGCA AACCACTCAAGAGTGGCGTAATGCTGGCTTTCATCCTGTGCTCAACGAGCGTGAGCAGAGCATGGCGGCTAATATAGACG CAGGTTTGATTTCACGTATGCTGCAACAAAAAGAACGCCATCCATTACCGGACCAATTTCAATTAGAAGGTTTTGATTTC TCCATCGATCGTGAACAAACGTGTCCAACCATTGAAGAGTACGATCAATACGAACGTGATAACCCGACATGGGGAATGCC TTTTGGTATGCCTAACTTAACGGCGGCAGAATATAAGACCCTGATGCTGTGGTTGGAAAATGGCGCCATCATGAATGCGC ATGTACCACTGACAGAGCAACAACAAACAGAGATAGATAAGTACGAAGCATTACTGAACAAAAGTTCTCGTAAAAATCAA CTTGCTGCTCGCTACATTTACGAGCACCTTTTCTTATCTGACCTATTCTTCTCTGAGTTGGATGGCGAACAGCCGCGTTT CTTTACCTTAGTTCGCTCTGCTACACCGCCGGGTCAGCCAGTGAAACTTATTACGACTCGTCGCCCATATGATGACCCGA AGGTCGAGCGTGTTTACTACCGCATCATTCCAGAGCAAGGCACTATCGTCGATAAAACGCACATGCCATTTGCGCTTAAT GAGCAGCGTATCGAGAATTGGAAAAAATGGTTCATAGATGCGGATTATGAAGTAGCACAACTGCCAAGCTATGAGCCTGA AATTGCGGCAAACCCAATGACGGCTTTCATTGATTTGCCTGTGAAATCTCGCTTCAAATTTATGTTGGACAACGCTCAGA ACACCATCATGGCCTACATCAAAGGCCCGGTATGTCGTGGGCAGCTGGCGTTAAACGTGATTAATGACCGCTTTTGGGTA TTCTTCTTAGATCCAGACAAAGCCAACATCCCTGAAGTGAACGAGTTCTACCGCTCGCAAGCAGCCAATTTGAAGCTTCC GGGAGAGCTTGAGAGTAATACCGTACCCGTGACTAACTGGGTGAAATACTCACGCCAACAAGCGCGTTACCTAGAAGCAA AATCTGACTTCATCAACAAATGGTTTAAGAACGGTGAACACCTTTCTACGGACGTAATTTGGGATGGCAACGGCACCAAC CCCAATGCTGCGCTTACCGTATTCCGACACTTTGACAGTGCATCGGTGGTACAAGGCTTAGTTGGTGAGCAACCTAAAAC CGCTTGGGTACTGGACTATGCCCTCCTAGAACGCATTCACTACCTGCTTGTTGCTGGTTTCGATGTTTACGGTAACTTTG GCCACCAGCTGATCACTCGCATGTTCATGGACTTCTTACGTCTGGAAGGGGAAAGTAACTTCATCGCCCTACTTCCTGCG GATATGCGTCATCAAGAACATTCAAACTGGTACCAAGATCAGCCCCGCCAGTTAAGTGATTTCTTGCAACGCAATGTCGC TCCATTTAGTCAGCCAACTAGCGTCGTCTACCATACTGATGATCCTAAGTCAGAGCTATTGGATATTCTACGTAAGCAAG TTTCACCTATCCTGCTGCCACGCTACGATATCATCGATACGGCGCTGACAGTAGAAAGCGAACAGCAATTGGCGAGTATC AACCAAGTTCGTGGAGAGGGATTAAAAACCGTTCCGCAAATCACCATGCTGATGGTTCGCAGTGAATCTGGGAAAGATGA GCTGTTTACCCTTCTTCACAATAATGCGCACATCAACATTTCGAGCCTATTTAATGAAGAGAGCAACCGTGACTTTGCCA ACGATGATATGACCATCGTTCGAGGAGTCGTTGGTAGCTATCCGGCAGCATTTTTCTCGATCGAAGAAGATCAAGTAAAA GAATTTGTCGATCAATTTAGCACCCTAAAATCAGAGAGTGATTACGTTAAGTTACTGGATAATTTTGCGATTCGCCGAAG CTCAGAAAAGTTCTGGCCATTTAGCGATCGAATCCACGCTTGGTATCGTACAAATCAACCAATAGAATCTGGTTTACTTG ACTATAATCGTTTTGAGAATCGTTGA
Upstream 100 bases:
>100_bases AAAGTCGGAGCGAATTGCTCCGATTTTTGGTATTTAGCGGCGTATTTTGCTTTAATTAACGCAAATTCAATTTACTCAAA ATAACTCAATCAATTTACGT
Downstream 100 bases:
>100_bases TGATTTAAGGGGGTTCTCATGAGTATCCGAGACAACATTGCCGCTCTCGAGCAACAGATTTACGTTGCTTGCTCAGAGGG GGATTACGACACGGTCAACA
Product: hypothetical protein
Products: NA
Alternate protein names: Fatty Acid Cistrans Isomerase; Esterified Fatty Acid Cis/Trans Isomerase; Cis/Trans Isomerase; 9-Hexadecenoic Acid Cis-Trans Isomerase; Fatty Acid Cis/Trans Isomerase Superfamily; Fatty Acid Cis/Trans Isomerase Superfamily Protein; Type IIA poisomerase B Subunit; Isomerase; Fatty Acid Cis-Trans Isomerase; Exported Fatty Acid Cis/Trans Isomerase; Esterified Fatty Acid Cis/Trans Isomerase Family Protein
Number of amino acids: Translated: 781; Mature: 781
Protein sequence:
>781_residues MIFILCIATLFAGCATYAGLNYDQLFGSQQVRERTATIDTPQADFFQHDVKPIVDNRCVVCHACYDAPCQLKLSSVEGID RGASKALVYEGTRLTAAAPTRLFEDAQTTQEWRNAGFHPVLNEREQSMAANIDAGLISRMLQQKERHPLPDQFQLEGFDF SIDREQTCPTIEEYDQYERDNPTWGMPFGMPNLTAAEYKTLMLWLENGAIMNAHVPLTEQQQTEIDKYEALLNKSSRKNQ LAARYIYEHLFLSDLFFSELDGEQPRFFTLVRSATPPGQPVKLITTRRPYDDPKVERVYYRIIPEQGTIVDKTHMPFALN EQRIENWKKWFIDADYEVAQLPSYEPEIAANPMTAFIDLPVKSRFKFMLDNAQNTIMAYIKGPVCRGQLALNVINDRFWV FFLDPDKANIPEVNEFYRSQAANLKLPGELESNTVPVTNWVKYSRQQARYLEAKSDFINKWFKNGEHLSTDVIWDGNGTN PNAALTVFRHFDSASVVQGLVGEQPKTAWVLDYALLERIHYLLVAGFDVYGNFGHQLITRMFMDFLRLEGESNFIALLPA DMRHQEHSNWYQDQPRQLSDFLQRNVAPFSQPTSVVYHTDDPKSELLDILRKQVSPILLPRYDIIDTALTVESEQQLASI NQVRGEGLKTVPQITMLMVRSESGKDELFTLLHNNAHINISSLFNEESNRDFANDDMTIVRGVVGSYPAAFFSIEEDQVK EFVDQFSTLKSESDYVKLLDNFAIRRSSEKFWPFSDRIHAWYRTNQPIESGLLDYNRFENR
Sequences:
>Translated_781_residues MIFILCIATLFAGCATYAGLNYDQLFGSQQVRERTATIDTPQADFFQHDVKPIVDNRCVVCHACYDAPCQLKLSSVEGID RGASKALVYEGTRLTAAAPTRLFEDAQTTQEWRNAGFHPVLNEREQSMAANIDAGLISRMLQQKERHPLPDQFQLEGFDF SIDREQTCPTIEEYDQYERDNPTWGMPFGMPNLTAAEYKTLMLWLENGAIMNAHVPLTEQQQTEIDKYEALLNKSSRKNQ LAARYIYEHLFLSDLFFSELDGEQPRFFTLVRSATPPGQPVKLITTRRPYDDPKVERVYYRIIPEQGTIVDKTHMPFALN EQRIENWKKWFIDADYEVAQLPSYEPEIAANPMTAFIDLPVKSRFKFMLDNAQNTIMAYIKGPVCRGQLALNVINDRFWV FFLDPDKANIPEVNEFYRSQAANLKLPGELESNTVPVTNWVKYSRQQARYLEAKSDFINKWFKNGEHLSTDVIWDGNGTN PNAALTVFRHFDSASVVQGLVGEQPKTAWVLDYALLERIHYLLVAGFDVYGNFGHQLITRMFMDFLRLEGESNFIALLPA DMRHQEHSNWYQDQPRQLSDFLQRNVAPFSQPTSVVYHTDDPKSELLDILRKQVSPILLPRYDIIDTALTVESEQQLASI NQVRGEGLKTVPQITMLMVRSESGKDELFTLLHNNAHINISSLFNEESNRDFANDDMTIVRGVVGSYPAAFFSIEEDQVK EFVDQFSTLKSESDYVKLLDNFAIRRSSEKFWPFSDRIHAWYRTNQPIESGLLDYNRFENR >Mature_781_residues MIFILCIATLFAGCATYAGLNYDQLFGSQQVRERTATIDTPQADFFQHDVKPIVDNRCVVCHACYDAPCQLKLSSVEGID RGASKALVYEGTRLTAAAPTRLFEDAQTTQEWRNAGFHPVLNEREQSMAANIDAGLISRMLQQKERHPLPDQFQLEGFDF SIDREQTCPTIEEYDQYERDNPTWGMPFGMPNLTAAEYKTLMLWLENGAIMNAHVPLTEQQQTEIDKYEALLNKSSRKNQ LAARYIYEHLFLSDLFFSELDGEQPRFFTLVRSATPPGQPVKLITTRRPYDDPKVERVYYRIIPEQGTIVDKTHMPFALN EQRIENWKKWFIDADYEVAQLPSYEPEIAANPMTAFIDLPVKSRFKFMLDNAQNTIMAYIKGPVCRGQLALNVINDRFWV FFLDPDKANIPEVNEFYRSQAANLKLPGELESNTVPVTNWVKYSRQQARYLEAKSDFINKWFKNGEHLSTDVIWDGNGTN PNAALTVFRHFDSASVVQGLVGEQPKTAWVLDYALLERIHYLLVAGFDVYGNFGHQLITRMFMDFLRLEGESNFIALLPA DMRHQEHSNWYQDQPRQLSDFLQRNVAPFSQPTSVVYHTDDPKSELLDILRKQVSPILLPRYDIIDTALTVESEQQLASI NQVRGEGLKTVPQITMLMVRSESGKDELFTLLHNNAHINISSLFNEESNRDFANDDMTIVRGVVGSYPAAFFSIEEDQVK EFVDQFSTLKSESDYVKLLDNFAIRRSSEKFWPFSDRIHAWYRTNQPIESGLLDYNRFENR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 89956; Mature: 89956
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFILCIATLFAGCATYAGLNYDQLFGSQQVRERTATIDTPQADFFQHDVKPIVDNRCVV CCHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHCCCCCCCHHHHHHCCCHHHCCCEEE CHACYDAPCQLKLSSVEGIDRGASKALVYEGTRLTAAAPTRLFEDAQTTQEWRNAGFHPV EEECCCCCCEEEECCCCCCCCCCCCEEEEECCEEEECCCHHHHHHHHHHHHHHCCCCCCC LNEREQSMAANIDAGLISRMLQQKERHPLPDQFQLEGFDFSIDREQTCPTIEEYDQYERD CCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEECCCCEECCCCCCCCCHHHHHHHCCC NPTWGMPFGMPNLTAAEYKTLMLWLENGAIMNAHVPLTEQQQTEIDKYEALLNKSSRKNQ CCCCCCCCCCCCCCHHHHHEEEEEEECCEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHH LAARYIYEHLFLSDLFFSELDGEQPRFFTLVRSATPPGQPVKLITTRRPYDDPKVERVYY HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCHHEEEEE RIIPEQGTIVDKTHMPFALNEQRIENWKKWFIDADYEVAQLPSYEPEIAANPMTAFIDLP EEECCCCCEEECCCCCEEECHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCEEEEECC VKSRFKFMLDNAQNTIMAYIKGPVCRGQLALNVINDRFWVFFLDPDKANIPEVNEFYRSQ HHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEECCEEEEEEECCCCCCCCHHHHHHHHH AANLKLPGELESNTVPVTNWVKYSRQQARYLEAKSDFINKWFKNGEHLSTDVIWDGNGTN CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCC PNAALTVFRHFDSASVVQGLVGEQPKTAWVLDYALLERIHYLLVAGFDVYGNFGHQLITR CCCEEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHH MFMDFLRLEGESNFIALLPADMRHQEHSNWYQDQPRQLSDFLQRNVAPFSQPTSVVYHTD HHHHHHHHCCCCCEEEEECCHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECC DPKSELLDILRKQVSPILLPRYDIIDTALTVESEQQLASINQVRGEGLKTVPQITMLMVR CCHHHHHHHHHHHCCCEECCCHHHHHHHEEECCHHHHHHHHHHHCCCCCHHHHHEEEEEE SESGKDELFTLLHNNAHINISSLFNEESNRDFANDDMTIVRGVVGSYPAAFFSIEEDQVK CCCCHHHHHHHEECCCEEEHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHHH EFVDQFSTLKSESDYVKLLDNFAIRRSSEKFWPFSDRIHAWYRTNQPIESGLLDYNRFEN HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHEEECCCCCHHHHCCCCHHHCC R C >Mature Secondary Structure MIFILCIATLFAGCATYAGLNYDQLFGSQQVRERTATIDTPQADFFQHDVKPIVDNRCVV CCHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHCCCCCCCHHHHHHCCCHHHCCCEEE CHACYDAPCQLKLSSVEGIDRGASKALVYEGTRLTAAAPTRLFEDAQTTQEWRNAGFHPV EEECCCCCCEEEECCCCCCCCCCCCEEEEECCEEEECCCHHHHHHHHHHHHHHCCCCCCC LNEREQSMAANIDAGLISRMLQQKERHPLPDQFQLEGFDFSIDREQTCPTIEEYDQYERD CCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEECCCCEECCCCCCCCCHHHHHHHCCC NPTWGMPFGMPNLTAAEYKTLMLWLENGAIMNAHVPLTEQQQTEIDKYEALLNKSSRKNQ CCCCCCCCCCCCCCHHHHHEEEEEEECCEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHH LAARYIYEHLFLSDLFFSELDGEQPRFFTLVRSATPPGQPVKLITTRRPYDDPKVERVYY HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCHHEEEEE RIIPEQGTIVDKTHMPFALNEQRIENWKKWFIDADYEVAQLPSYEPEIAANPMTAFIDLP EEECCCCCEEECCCCCEEECHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCEEEEECC VKSRFKFMLDNAQNTIMAYIKGPVCRGQLALNVINDRFWVFFLDPDKANIPEVNEFYRSQ HHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEECCEEEEEEECCCCCCCCHHHHHHHHH AANLKLPGELESNTVPVTNWVKYSRQQARYLEAKSDFINKWFKNGEHLSTDVIWDGNGTN CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCC PNAALTVFRHFDSASVVQGLVGEQPKTAWVLDYALLERIHYLLVAGFDVYGNFGHQLITR CCCEEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHH MFMDFLRLEGESNFIALLPADMRHQEHSNWYQDQPRQLSDFLQRNVAPFSQPTSVVYHTD HHHHHHHHCCCCCEEEEECCHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECC DPKSELLDILRKQVSPILLPRYDIIDTALTVESEQQLASINQVRGEGLKTVPQITMLMVR CCHHHHHHHHHHHCCCEECCCHHHHHHHEEECCHHHHHHHHHHHCCCCCHHHHHEEEEEE SESGKDELFTLLHNNAHINISSLFNEESNRDFANDDMTIVRGVVGSYPAAFFSIEEDQVK CCCCHHHHHHHEECCCEEEHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHHH EFVDQFSTLKSESDYVKLLDNFAIRRSSEKFWPFSDRIHAWYRTNQPIESGLLDYNRFEN HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHEEECCCCCHHHHCCCCHHHCC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA