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The map label for this gene is atpC [H]

Identifier: 156977317

GI number: 156977317

Start: 1265735

End: 1266172

Strand: Reverse

Name: atpC [H]

Synonym: VIBHAR_06103

Alternate gene names: 156977317

Gene position: 1266172-1265735 (Counterclockwise)

Preceding gene: 156977318

Following gene: 156977316

Centisome position: 57.45

GC content: 51.14

Gene sequence:

>438_bases
ATGGCCATAGCGGTTTCACAAAATACGTTTCAACTGAATGTGGTAAGTGCAGAGGGCACACTTTACTCAGGTCCAGCGCA
CGCTATCGCGGTAGCAGGTGCGGATGGTGAGCTAGGTATTCGTCCTGGTCACTCACCGCTGATCAGTAAAATCAAGCCGG
GTGTTGCTCGTATTACCGGTGACTTGTCGAAGCCTGAAGAGATTCTCTATGTCTCTGGTGGTTTGGTCGAAGTCCAACCC
GATGTGGTTACTGTGCTAGCGGATACTGCGCTACACGGCAAAGACATCGACAAGGCAAGGGCAGAAGAAGCTCGCAGAGC
GGCGGAAGAAAACATTCGCGCGCATGTGGACGACATCAGCTTTGCACAGGCACACATGGAGTTGAACAAAGCATTGGCAC
AACTTCGTGCAGTAGAACTAACGATGAGAATTCGTTAG

Upstream 100 bases:

>100_bases
TGGTCAGTACGACGACATCCCAGAGCAGGCATTTATGTACTGCGGCAACATCGACGAAGTGCTTGAAAAAGCGAAAAAAC
TGTAAAGCGCGGGAGGCAAT

Downstream 100 bases:

>100_bases
TCACTTTTTCGGAATGCGGTCTGAAGAGTGGTAATCAACGGGGCAACTTCGGTTCGCCCCGTTTTATTTTTAGTGAAAAT
CATAAAGGGATTGATTTGTT

Product: F0F1 ATP synthase subunit epsilon

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F1 sector epsilon subunit 2; F-ATPase epsilon subunit 2 [H]

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MAIAVSQNTFQLNVVSAEGTLYSGPAHAIAVAGADGELGIRPGHSPLISKIKPGVARITGDLSKPEEILYVSGGLVEVQP
DVVTVLADTALHGKDIDKARAEEARRAAEENIRAHVDDISFAQAHMELNKALAQLRAVELTMRIR

Sequences:

>Translated_145_residues
MAIAVSQNTFQLNVVSAEGTLYSGPAHAIAVAGADGELGIRPGHSPLISKIKPGVARITGDLSKPEEILYVSGGLVEVQP
DVVTVLADTALHGKDIDKARAEEARRAAEENIRAHVDDISFAQAHMELNKALAQLRAVELTMRIR
>Mature_144_residues
AIAVSQNTFQLNVVSAEGTLYSGPAHAIAVAGADGELGIRPGHSPLISKIKPGVARITGDLSKPEEILYVSGGLVEVQPD
VVTVLADTALHGKDIDKARAEEARRAAEENIRAHVDDISFAQAHMELNKALAQLRAVELTMRIR

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane [H]

COG id: COG0355

COG function: function code C; F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase epsilon chain family [H]

Homologues:

Organism=Escherichia coli, GI1790169, Length=135, Percent_Identity=54.8148148148148, Blast_Score=147, Evalue=3e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001469
- InterPro:   IPR020547
- InterPro:   IPR020546
- ProDom:   PD000944 [H]

Pfam domain/function: PF00401 ATP-synt_DE; PF02823 ATP-synt_DE_N [H]

EC number: 3.6.3.14

Molecular weight: Translated: 15413; Mature: 15282

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIAVSQNTFQLNVVSAEGTLYSGPAHAIAVAGADGELGIRPGHSPLISKIKPGVARITG
CEEEECCCEEEEEEEECCCEEECCCCCEEEEECCCCCCCCCCCCCHHHHHCCCCHHEEEC
DLSKPEEILYVSGGLVEVQPDVVTVLADTALHGKDIDKARAEEARRAAEENIRAHVDDIS
CCCCCCEEEEEECCEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHEECCCHH
FAQAHMELNKALAQLRAVELTMRIR
HHHHHHHHHHHHHHHHHHHEEEECC
>Mature Secondary Structure 
AIAVSQNTFQLNVVSAEGTLYSGPAHAIAVAGADGELGIRPGHSPLISKIKPGVARITG
EEEECCCEEEEEEEECCCEEECCCCCEEEEECCCCCCCCCCCCCHHHHHCCCCHHEEEC
DLSKPEEILYVSGGLVEVQPDVVTVLADTALHGKDIDKARAEEARRAAEENIRAHVDDIS
CCCCCCEEEEEECCEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHEECCCHH
FAQAHMELNKALAQLRAVELTMRIR
HHHHHHHHHHHHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA