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The map label for this gene is 156977180

Identifier: 156977180

GI number: 156977180

Start: 1155194

End: 1155919

Strand: Direct

Name: 156977180

Synonym: VIBHAR_05966

Alternate gene names: NA

Gene position: 1155194-1155919 (Clockwise)

Preceding gene: 156977174

Following gene: 156977185

Centisome position: 52.41

GC content: 46.01

Gene sequence:

>726_bases
ATGACAGAAAGAAAGCAAGGCCGTAGAAGTGCCGAAGCCGCTGAGCAAACTAAGTGCCTGATTCTTAGAGTCGCGGCAGA
TATGTTCTGTGAGTTAGGGTACGAACGAGTTTCGCTTCGCAACATCAGTGAGAAAGCTGGTGTGTCCCATAGTTTGATTC
GCCACCACTTCGGCAGTAAAGAGAAGATCTGGCAAGCAGTGAGCAACGGCATGGATGACTTCTTGCAAAGCTATATGGTA
CAGCTAGTCAACGAAATGCCGGAAAATACCCCGCCTAATCAAAAAATCTACCTGTTCATGGTAAGAATACTGGCATTTGC
ACTCATGAACCCGCACCCAATCCAAATGATTGCGGATGCGATTCGCCAAGACGACGATGCCCTACCGCTATACTTCTTAC
GTTCGGAAGATGAATTCGCGGCGATCTTCACTCAGATATCCTCAGAATATAATCAAGAGTGCCCTGAAACACCGACCGAT
CATTGGGAATCAAAATGGCAAATGCTGTTGTTCGCTCATGGCGCAGTAAGCTTAACGCCGATGATGCAAAAAACATGGCC
AGCGATGGCAGAAAACCGAGATAAGCTACTGATCAACCATTGGGAGTTGTTCAACACCATCATGGCGAACCAATTTGGTA
TCTGCAAAGAAGACATGATTCACCCAGAGCATTTAAGTGAAATCGTGATTAAGATGTGCTGTCCGATTGAAGAATTGACT
GCTTAA

Upstream 100 bases:

>100_bases
GATCAACATATTTTCCATTTGGATAATAAAATAATTAGTCAAAGTGTCCGGTTTCTGGTAAAAATAGGCGCGTTGATTAA
TATTCGGGAAAATTCGAACT

Downstream 100 bases:

>100_bases
CAGACGCCTGCTCAACAAACATAAAAATGCCGAGCACTGAGCTCCAATGCCGTTCGGATAAGCATTAATGCTTATATCTA
AATGGATATTTTGTAGGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; TetR Family Transcriptional Regulator; Regulatory Protein TetR

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MTERKQGRRSAEAAEQTKCLILRVAADMFCELGYERVSLRNISEKAGVSHSLIRHHFGSKEKIWQAVSNGMDDFLQSYMV
QLVNEMPENTPPNQKIYLFMVRILAFALMNPHPIQMIADAIRQDDDALPLYFLRSEDEFAAIFTQISSEYNQECPETPTD
HWESKWQMLLFAHGAVSLTPMMQKTWPAMAENRDKLLINHWELFNTIMANQFGICKEDMIHPEHLSEIVIKMCCPIEELT
A

Sequences:

>Translated_241_residues
MTERKQGRRSAEAAEQTKCLILRVAADMFCELGYERVSLRNISEKAGVSHSLIRHHFGSKEKIWQAVSNGMDDFLQSYMV
QLVNEMPENTPPNQKIYLFMVRILAFALMNPHPIQMIADAIRQDDDALPLYFLRSEDEFAAIFTQISSEYNQECPETPTD
HWESKWQMLLFAHGAVSLTPMMQKTWPAMAENRDKLLINHWELFNTIMANQFGICKEDMIHPEHLSEIVIKMCCPIEELT
A
>Mature_240_residues
TERKQGRRSAEAAEQTKCLILRVAADMFCELGYERVSLRNISEKAGVSHSLIRHHFGSKEKIWQAVSNGMDDFLQSYMVQ
LVNEMPENTPPNQKIYLFMVRILAFALMNPHPIQMIADAIRQDDDALPLYFLRSEDEFAAIFTQISSEYNQECPETPTDH
WESKWQMLLFAHGAVSLTPMMQKTWPAMAENRDKLLINHWELFNTIMANQFGICKEDMIHPEHLSEIVIKMCCPIEELTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27882; Mature: 27751

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
8.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTERKQGRRSAEAAEQTKCLILRVAADMFCELGYERVSLRNISEKAGVSHSLIRHHFGSK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCHHHHHHHHHCCCH
EKIWQAVSNGMDDFLQSYMVQLVNEMPENTPPNQKIYLFMVRILAFALMNPHPIQMIADA
HHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
IRQDDDALPLYFLRSEDEFAAIFTQISSEYNQECPETPTDHWESKWQMLLFAHGAVSLTP
HHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHH
MMQKTWPAMAENRDKLLINHWELFNTIMANQFGICKEDMIHPEHLSEIVIKMCCPIEELT
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHCCHHHHC
A
C
>Mature Secondary Structure 
TERKQGRRSAEAAEQTKCLILRVAADMFCELGYERVSLRNISEKAGVSHSLIRHHFGSK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCHHHHHHHHHCCCH
EKIWQAVSNGMDDFLQSYMVQLVNEMPENTPPNQKIYLFMVRILAFALMNPHPIQMIADA
HHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
IRQDDDALPLYFLRSEDEFAAIFTQISSEYNQECPETPTDHWESKWQMLLFAHGAVSLTP
HHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHH
MMQKTWPAMAENRDKLLINHWELFNTIMANQFGICKEDMIHPEHLSEIVIKMCCPIEELT
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHCCHHHHC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA