| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
Click here to switch to the map view.
The map label for this gene is fruA [H]
Identifier: 156977174
GI number: 156977174
Start: 1147155
End: 1148900
Strand: Direct
Name: fruA [H]
Synonym: VIBHAR_05960
Alternate gene names: 156977174
Gene position: 1147155-1148900 (Clockwise)
Preceding gene: 156977173
Following gene: 156977180
Centisome position: 52.05
GC content: 49.2
Gene sequence:
>1746_bases ATGAATATTGCCATTATTACAGCTTGTCCAAGTGGTGTTGCGAACAGCATCATTGCGGCAGGCCTACTAGAACAAGCAGC AGCTAAGTTGGGTTGGAACGCTAAGATTGAATGCCAATCAAACGTGGTTGAACCAACACTGCTAACAGACGCTGACATTG AACAAGCAGAAGCGATCGTAATTGCGGCTAACACTCCAGTTGATACTTCTCGTTTCGTAGGTAAAAAAGTCTACCAAGCA GATATCAGCACCGTTGCAAAAGACGCAATGGCTTTCCTACAGACTGCGGTTGAAAACTCAGCAACACTAGAGCAAGCAAC CACAGATACGGCACAAGTAGCAGCACCAGCAGAAAGCGCATCTGCAACGAAGAAGATCGTTGCGGTCACAGCATGTCCAA CTGGCGTAGCACACACCTTCATGGCAGCAGAGGCGCTAGAGGAAGAAGGCAAACGTCGTGGTCACCAAATCAAAGTGGAA ACGCGTGGCTCAGTAGGTGCGAAAAACCAACTGACTGATCAAGAAATCGCAGACGCAGATTTAGTGATCATCGCAGCGGA TATTGAAGTACCTCTTGACCGCTTCAACGGCAAAAAAATGTACCGTACTAAAACAGGCCCAGCGCTGAAGAAAACAGCGG AAGAAATGGACAAAGCGTTTGAACAAGCAAGCGTATACCAACACTCTGGTTCTTCTAGCGCATCATCAACGACAGAAGAG AAGAAAGGCGCGTACAAGCACCTAATGACTGGTGTATCTCACATGCTTCCAGTTGTGGTTGCAGGTGGTTTGATCATCGC CCTATCCTTCGTATTTGGTATCGAAGCATTTAAAGAAGAAGGCACGCTAGCAGCAGCACTGATGAACATCGGTGGTGGCT CAGCATTCGCTCTGATGATTCCAGTGCTTGCTGGCTACATCGCCTTCTCTATTGCTGACCGTCCAGGTCTGGCTCCGGGT CTTGTGGGCGGTATGCTTGCTAGCTCAACCGGCGCAGGTTTCCTTGGTGGTATCGCAGCAGGTTTCATTGCCGGTTACGC AGCGAAGTTCCTAGCCGACAAAGTAAAACTTCCACAATCAATGGAAGCGCTTAAACCGATCCTTATCATTCCTTTCGTGG CGACACTGTTCACGGGTCTGGTGATGATTTACATCGTAGGTGGTCCGGTTTCAGGCATCATGAGCGGCCTAACTGACTTC CTAAACAACATGGGTTCTGACAGCGCAGTTCTACTGGGTATTATCCTTGGCGCAATGATGTGTTTCGACCTAGGTGGTCC AGTAAACAAAGCCGCTTACGCATTCGGTGTGGGTCTATTGGCTTCGCAAACTTACGCGCCAATGGCGGCAATCATGGCGG CAGGTATGGTTCCTGCGCTTGGTATGGGTCTTGCGACATTCCTTGCTAAGAACAAGTTTGAGCAAAGCGAGCGTGAAGCG GGTAAAGCATCATTCGTTCTTGGTCTGTGCTTTATCTCTGAAGGTGCAATCCCATTTGCAGCGAAAGATCCAATGCGTGT TATCCCATCATGCATGGCAGGTGGCGCACTAACAGGTGCACTATCTATGCTGTTCGGTGCAAAACTGATGGCACCACACG GTGGCTTGTTCGTGCTGCTTATCCCTAACGCAATCTCACCAGTCCTGATGTACTTGGTAGCAATTGCAGCAGGTACAGCG GTAACGGGCTTCACTTACGCGTTCCTAAAGAACAAATCAGAAGCGGAACAACAAGCTGCAGCTTAA
Upstream 100 bases:
>100_bases AGTCAGGAAGAACTGGAGAACATTAAGCTCCAAACCGAAGTTACCGAGCTTTACCCTAATACGAACTTAGACAAAAACTA AGGAACAGAAGGTTATCAGT
Downstream 100 bases:
>100_bases TCGCAAACAGCGATTAAATAACAGTTAACAATGCCTCCCTCGATTTGGCATTCGACACCTCCCTCAAGGCTCGGCTTTGG GAGGTGTTTTTTATTATGTC
Product: PTS system fructose-specific IIBC component
Products: NA
Alternate protein names: EIIBC-Fru; Fructose-specific phosphotransferase enzyme IIB component; EIII-Fru; PTS system fructose-specific EIIB component; Fructose permease IIC component; PTS system fructose-specific EIIC component [H]
Number of amino acids: Translated: 581; Mature: 581
Protein sequence:
>581_residues MNIAIITACPSGVANSIIAAGLLEQAAAKLGWNAKIECQSNVVEPTLLTDADIEQAEAIVIAANTPVDTSRFVGKKVYQA DISTVAKDAMAFLQTAVENSATLEQATTDTAQVAAPAESASATKKIVAVTACPTGVAHTFMAAEALEEEGKRRGHQIKVE TRGSVGAKNQLTDQEIADADLVIIAADIEVPLDRFNGKKMYRTKTGPALKKTAEEMDKAFEQASVYQHSGSSSASSTTEE KKGAYKHLMTGVSHMLPVVVAGGLIIALSFVFGIEAFKEEGTLAAALMNIGGGSAFALMIPVLAGYIAFSIADRPGLAPG LVGGMLASSTGAGFLGGIAAGFIAGYAAKFLADKVKLPQSMEALKPILIIPFVATLFTGLVMIYIVGGPVSGIMSGLTDF LNNMGSDSAVLLGIILGAMMCFDLGGPVNKAAYAFGVGLLASQTYAPMAAIMAAGMVPALGMGLATFLAKNKFEQSEREA GKASFVLGLCFISEGAIPFAAKDPMRVIPSCMAGGALTGALSMLFGAKLMAPHGGLFVLLIPNAISPVLMYLVAIAAGTA VTGFTYAFLKNKSEAEQQAAA
Sequences:
>Translated_581_residues MNIAIITACPSGVANSIIAAGLLEQAAAKLGWNAKIECQSNVVEPTLLTDADIEQAEAIVIAANTPVDTSRFVGKKVYQA DISTVAKDAMAFLQTAVENSATLEQATTDTAQVAAPAESASATKKIVAVTACPTGVAHTFMAAEALEEEGKRRGHQIKVE TRGSVGAKNQLTDQEIADADLVIIAADIEVPLDRFNGKKMYRTKTGPALKKTAEEMDKAFEQASVYQHSGSSSASSTTEE KKGAYKHLMTGVSHMLPVVVAGGLIIALSFVFGIEAFKEEGTLAAALMNIGGGSAFALMIPVLAGYIAFSIADRPGLAPG LVGGMLASSTGAGFLGGIAAGFIAGYAAKFLADKVKLPQSMEALKPILIIPFVATLFTGLVMIYIVGGPVSGIMSGLTDF LNNMGSDSAVLLGIILGAMMCFDLGGPVNKAAYAFGVGLLASQTYAPMAAIMAAGMVPALGMGLATFLAKNKFEQSEREA GKASFVLGLCFISEGAIPFAAKDPMRVIPSCMAGGALTGALSMLFGAKLMAPHGGLFVLLIPNAISPVLMYLVAIAAGTA VTGFTYAFLKNKSEAEQQAAA >Mature_581_residues MNIAIITACPSGVANSIIAAGLLEQAAAKLGWNAKIECQSNVVEPTLLTDADIEQAEAIVIAANTPVDTSRFVGKKVYQA DISTVAKDAMAFLQTAVENSATLEQATTDTAQVAAPAESASATKKIVAVTACPTGVAHTFMAAEALEEEGKRRGHQIKVE TRGSVGAKNQLTDQEIADADLVIIAADIEVPLDRFNGKKMYRTKTGPALKKTAEEMDKAFEQASVYQHSGSSSASSTTEE KKGAYKHLMTGVSHMLPVVVAGGLIIALSFVFGIEAFKEEGTLAAALMNIGGGSAFALMIPVLAGYIAFSIADRPGLAPG LVGGMLASSTGAGFLGGIAAGFIAGYAAKFLADKVKLPQSMEALKPILIIPFVATLFTGLVMIYIVGGPVSGIMSGLTDF LNNMGSDSAVLLGIILGAMMCFDLGGPVNKAAYAFGVGLLASQTYAPMAAIMAAGMVPALGMGLATFLAKNKFEQSEREA GKASFVLGLCFISEGAIPFAAKDPMRVIPSCMAGGALTGALSMLFGAKLMAPHGGLFVLLIPNAISPVLMYLVAIAAGTA VTGFTYAFLKNKSEAEQQAAA
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1299
COG function: function code G; Phosphotransferase system, fructose-specific IIC component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI1788492, Length=574, Percent_Identity=63.0662020905923, Blast_Score=670, Evalue=0.0, Organism=Escherichia coli, GI1786951, Length=511, Percent_Identity=36.2035225048924, Blast_Score=281, Evalue=1e-76, Organism=Escherichia coli, GI87082348, Length=478, Percent_Identity=35.3556485355649, Blast_Score=264, Evalue=1e-71, Organism=Escherichia coli, GI1790386, Length=305, Percent_Identity=43.9344262295082, Blast_Score=224, Evalue=9e-60, Organism=Escherichia coli, GI1788729, Length=397, Percent_Identity=27.455919395466, Blast_Score=127, Evalue=2e-30, Organism=Escherichia coli, GI1790387, Length=88, Percent_Identity=52.2727272727273, Blast_Score=99, Evalue=6e-22, Organism=Escherichia coli, GI1788730, Length=93, Percent_Identity=43.010752688172, Blast_Score=80, Evalue=5e-16, Organism=Escherichia coli, GI1790390, Length=65, Percent_Identity=46.1538461538462, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013011 - InterPro: IPR003501 - InterPro: IPR003352 - InterPro: IPR013014 - InterPro: IPR003353 - InterPro: IPR006327 [H]
Pfam domain/function: PF02378 PTS_EIIC; PF02302 PTS_IIB [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 59759; Mature: 59759
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: PS51099 PTS_EIIB_TYPE_2 ; PS51104 PTS_EIIC_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIAIITACPSGVANSIIAAGLLEQAAAKLGWNAKIECQSNVVEPTLLTDADIEQAEAIV CCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEECCCCCCCCCEEE IAANTPVDTSRFVGKKVYQADISTVAKDAMAFLQTAVENSATLEQATTDTAQVAAPAESA EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHCCCCHHH SATKKIVAVTACPTGVAHTFMAAEALEEEGKRRGHQIKVETRGSVGAKNQLTDQEIADAD HHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHCCCC LVIIAADIEVPLDRFNGKKMYRTKTGPALKKTAEEMDKAFEQASVYQHSGSSSASSTTEE EEEEEECCCCCHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH KKGAYKHLMTGVSHMLPVVVAGGLIIALSFVFGIEAFKEEGTLAAALMNIGGGSAFALMI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHH PVLAGYIAFSIADRPGLAPGLVGGMLASSTGAGFLGGIAAGFIAGYAAKFLADKVKLPQS HHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH MEALKPILIIPFVATLFTGLVMIYIVGGPVSGIMSGLTDFLNNMGSDSAVLLGIILGAMM HHHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH CFDLGGPVNKAAYAFGVGLLASQTYAPMAAIMAAGMVPALGMGLATFLAKNKFEQSEREA HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GKASFVLGLCFISEGAIPFAAKDPMRVIPSCMAGGALTGALSMLFGAKLMAPHGGLFVLL CCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEE IPNAISPVLMYLVAIAAGTAVTGFTYAFLKNKSEAEQQAAA CCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHCCC >Mature Secondary Structure MNIAIITACPSGVANSIIAAGLLEQAAAKLGWNAKIECQSNVVEPTLLTDADIEQAEAIV CCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEECCCCCCCCCEEE IAANTPVDTSRFVGKKVYQADISTVAKDAMAFLQTAVENSATLEQATTDTAQVAAPAESA EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHCCCCHHH SATKKIVAVTACPTGVAHTFMAAEALEEEGKRRGHQIKVETRGSVGAKNQLTDQEIADAD HHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHCCCC LVIIAADIEVPLDRFNGKKMYRTKTGPALKKTAEEMDKAFEQASVYQHSGSSSASSTTEE EEEEEECCCCCHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH KKGAYKHLMTGVSHMLPVVVAGGLIIALSFVFGIEAFKEEGTLAAALMNIGGGSAFALMI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHH PVLAGYIAFSIADRPGLAPGLVGGMLASSTGAGFLGGIAAGFIAGYAAKFLADKVKLPQS HHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH MEALKPILIIPFVATLFTGLVMIYIVGGPVSGIMSGLTDFLNNMGSDSAVLLGIILGAMM HHHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH CFDLGGPVNKAAYAFGVGLLASQTYAPMAAIMAAGMVPALGMGLATFLAKNKFEQSEREA HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GKASFVLGLCFISEGAIPFAAKDPMRVIPSCMAGGALTGALSMLFGAKLMAPHGGLFVLL CCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEE IPNAISPVLMYLVAIAAGTAVTGFTYAFLKNKSEAEQQAAA CCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3076173; 9278503; 9097040; 1981619 [H]