| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977117
Identifier: 156977117
GI number: 156977117
Start: 1096651
End: 1096914
Strand: Reverse
Name: 156977117
Synonym: VIBHAR_05903
Alternate gene names: NA
Gene position: 1096914-1096651 (Counterclockwise)
Preceding gene: 156977118
Following gene: 156977116
Centisome position: 49.77
GC content: 47.35
Gene sequence:
>264_bases ATGCTACGCACCATGAAAATTGTACTGACTCCTGAACAAAAGCAGCAACTCGAACAGATGCACGACACTGAGCGTGATAG TCGTGTGTGCGACCGTATAAAAGCCGTTTTACTGGCTTCCGAGGGTTGGAGTCAGGTCATGATATCTCAAGCTCTTCGTA TTCATGAATCGACCGTTGCCCGTCATCTTAGTGATTATGTTCTCTCTGAAAAACTTAAACCTGAGAATGGTGGTAGCCAG AGCCTGAGGGCTCCCCACAACTAG
Upstream 100 bases:
>100_bases GAAAATTCAGCCGAGAATTTTGCTCAGATCAAGCGCTTGCCCCTTAATTTAGTATACCCGTGATCATTGAAGATGCTTGA TTTCTCATTAATTCAGGATC
Downstream 100 bases:
>100_bases CATAGAAGAATCATGTAGATAGCGTGAAAAGTAGGCAGATTCATTTTGATCGGCGATTATAGCATCAATTGAAAAGATAT GACCCGACGAGTCTCATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: Transposase And Inactivated Derivatives
Number of amino acids: Translated: 87; Mature: 87
Protein sequence:
>87_residues MLRTMKIVLTPEQKQQLEQMHDTERDSRVCDRIKAVLLASEGWSQVMISQALRIHESTVARHLSDYVLSEKLKPENGGSQ SLRAPHN
Sequences:
>Translated_87_residues MLRTMKIVLTPEQKQQLEQMHDTERDSRVCDRIKAVLLASEGWSQVMISQALRIHESTVARHLSDYVLSEKLKPENGGSQ SLRAPHN >Mature_87_residues MLRTMKIVLTPEQKQQLEQMHDTERDSRVCDRIKAVLLASEGWSQVMISQALRIHESTVARHLSDYVLSEKLKPENGGSQ SLRAPHN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9953; Mature: 9953
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRTMKIVLTPEQKQQLEQMHDTERDSRVCDRIKAVLLASEGWSQVMISQALRIHESTVA CCCCEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH RHLSDYVLSEKLKPENGGSQSLRAPHN HHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLRTMKIVLTPEQKQQLEQMHDTERDSRVCDRIKAVLLASEGWSQVMISQALRIHESTVA CCCCEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH RHLSDYVLSEKLKPENGGSQSLRAPHN HHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA