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The map label for this gene is yhhI [C]

Identifier: 156977118

GI number: 156977118

Start: 1096952

End: 1097377

Strand: Reverse

Name: yhhI [C]

Synonym: VIBHAR_05904

Alternate gene names: 156977118

Gene position: 1097377-1096952 (Counterclockwise)

Preceding gene: 156977119

Following gene: 156977117

Centisome position: 49.79

GC content: 41.08

Gene sequence:

>426_bases
GTGATTAAACCCCAAAAAGTGGTCGCTTATGCAGCGAAGGATGGAATACGGCTAGACAACCTAATGTCAGATGGATTTGA
TGAGGGTCATGGCCGATTAGTTAGACGACGATATTTTGCCTTTCCTTTGCCAGAAGAACTCCATAATCATGCGCTATCTG
GAATCAAATCCTGTATAGCCGTTGAGCGTATTGTTCAAGAAGGGAAAGGAGAGCCTAAAACTAGTCATTTCAGTTATTAC
ATTACCAACCACCCAGCCTCAGACCCTAAGCTAGCTGATTATGTCCGGCAACATTGGGAAATAGAAAGCTATCATTGGTT
ATTAGATGTCTATTTTAACGATGATAGAGATAAGAAATATGAAGAAAATTCAGCCGAGAATTTTGCTCAGATCAAGCGCT
TGCCCCTTAATTTAGTATACCCGTGA

Upstream 100 bases:

>100_bases
TCAATCTTTTATTGTCTTCCGACATAATTTGTAATTAGTGGCGTTTTTTTAATTATAATACAAGCACTTAACCCTCTTGA
CGTTGTTTTCTGTTCCATTG

Downstream 100 bases:

>100_bases
TCATTGAAGATGCTTGATTTCTCATTAATTCAGGATCATGCTACGCACCATGAAAATTGTACTGACTCCTGAACAAAAGC
AGCAACTCGAACAGATGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MIKPQKVVAYAAKDGIRLDNLMSDGFDEGHGRLVRRRYFAFPLPEELHNHALSGIKSCIAVERIVQEGKGEPKTSHFSYY
ITNHPASDPKLADYVRQHWEIESYHWLLDVYFNDDRDKKYEENSAENFAQIKRLPLNLVYP

Sequences:

>Translated_141_residues
MIKPQKVVAYAAKDGIRLDNLMSDGFDEGHGRLVRRRYFAFPLPEELHNHALSGIKSCIAVERIVQEGKGEPKTSHFSYY
ITNHPASDPKLADYVRQHWEIESYHWLLDVYFNDDRDKKYEENSAENFAQIKRLPLNLVYP
>Mature_141_residues
MIKPQKVVAYAAKDGIRLDNLMSDGFDEGHGRLVRRRYFAFPLPEELHNHALSGIKSCIAVERIVQEGKGEPKTSHFSYY
ITNHPASDPKLADYVRQHWEIESYHWLLDVYFNDDRDKKYEENSAENFAQIKRLPLNLVYP

Specific function: Unknown

COG id: COG5433

COG function: function code L; Transposase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789896, Length=119, Percent_Identity=33.6134453781513, Blast_Score=65, Evalue=2e-12,
Organism=Escherichia coli, GI1787733, Length=119, Percent_Identity=32.7731092436975, Blast_Score=61, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16480; Mature: 16480

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKPQKVVAYAAKDGIRLDNLMSDGFDEGHGRLVRRRYFAFPLPEELHNHALSGIKSCIA
CCCCHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
VERIVQEGKGEPKTSHFSYYITNHPASDPKLADYVRQHWEIESYHWLLDVYFNDDRDKKY
HHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCCCCHH
EENSAENFAQIKRLPLNLVYP
CCCCHHHHHHHHHCCCEECCC
>Mature Secondary Structure
MIKPQKVVAYAAKDGIRLDNLMSDGFDEGHGRLVRRRYFAFPLPEELHNHALSGIKSCIA
CCCCHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
VERIVQEGKGEPKTSHFSYYITNHPASDPKLADYVRQHWEIESYHWLLDVYFNDDRDKKY
HHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCCCCHH
EENSAENFAQIKRLPLNLVYP
CCCCHHHHHHHHHCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA