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The map label for this gene is 156977079

Identifier: 156977079

GI number: 156977079

Start: 1051589

End: 1053190

Strand: Reverse

Name: 156977079

Synonym: VIBHAR_05864

Alternate gene names: NA

Gene position: 1053190-1051589 (Counterclockwise)

Preceding gene: 156977080

Following gene: 156977078

Centisome position: 47.78

GC content: 45.94

Gene sequence:

>1602_bases
ATGTCAGTGATTGATATCGAACGTTTGCTTACGCCAATTTCTGATGCTGCTCCGGTAGGTGAAGACGCGCGCTACGAGTT
TTGCTATGAAATGATGGAATCCGAAGTGAAGAAGTTCGGCTCATTATTTGGTGAAACGGTAGATTGGACGGTCGTTAAAA
CGCACGCAACAGAAGTCTTAGAACAGCACAGCAAAGATTTAAAAGCGATCTGTTACTTGATTCGGGCACTAACGGAAGAG
TTTGGCTTACAAGGTTTCGAACAAGGCTTAAAGCTGCTTAGTCATGCGTTAAGTCAGTTTGGTGGTGAGCTTTACCCTTC
GCGTAAGCGTGGTAGAGATGGCGCGGTAGAATGGCTTAACCATCAGTTTAAACTGGTAAGCAGTAAGTTAGTGGAAAGCC
CGCAGTCTTGGGCGTTGGTTTCAAGTTGTATTTCTACTATCGAAGAAGTGCAGCGTCAGTACGACGACGTTTATCAAGAT
TCAGAAGCAGATTTTTTTGAGATCCGTACTCAGCTCAATATGTTATCTCAGCAAGCTGCTGTCGATGGCCAGAGCGATGA
CGGCTCTGCAAGTGAAGTTCAACCTGAACAAGCGCCTTCTGTGCCGGTAAGCATTACTCAACCTGAGCAAACGAATACTG
CTGTTTATTCGCCAAAGCCAGAAGAGGCTCAAAGCGCACCAGTTAAGCCGCTGTCGCCAGCTCCGAAGCCAGCGCCAGTC
AAGAAGGCCGTCACACAAGAAGTCTATGTTGATACGGACTTCTCATCACCGACGGCATCGAAACGTACGCTTAAGAAAGT
CGCGGAAGTGATGATTCACGCTAACCCAAGTGACCCTTTGGCATACCGAATTTATCGTCATCTGACTTGGGATGACATTG
ATGGTCTTCCTGATCATCAAAACAACGAAACGCCATTGAGCTTGGCGGTGTCTTCGGATCAACAGGCGGACTATCGTGAC
AAAGCTAATCAAGAAAGCGACATCGACACGATTAAACGGTTGGAGCGTACATTAACTGATGCACCATTCTGGCTGACGGG
GCATCACTTCGTGTACTCGATGCTCAATAACTTGGGCTTTGATGATGCGGCCATCGCTGTAAAGCAAGAAGTGAAACGTT
TTGTTGATTCATTAGAGGGCATTGAGCACCTCTCATTTAAGAATTCTATACCATTTGCAGATGAAGCAACCTTGAGCTGG
TTATCGACTCAAGATGCAGCTTCTTCAACTTCTCAACCTGTAGTGCAAACAGTTGTGATCTCTGAAGAAGATTCGCTGCC
GATGGAGGATATCACTCTAGAAAACCTAGGGGAATATGCCGCAGAACTTGCCCGCAAACTCGAGCTGGATAGCTCGGGAC
GTGGACAGTTTATGCTGTATTTACAATTGATAGCAGCTTACCAGTCTGTTGGATTATACCCATTGTGTCTGCCTTATCTT
GAGAAGGGTTGGGAAGTACAAAAAGCGTTTAATCTCGCGAGCTGGGAACCCCACTTATCGTCACAGTTAGAAGACCTGAT
TCGAAAAACACTCCATCAGTTATTCAGAAGTAAGGATCTTTTGCCTGAGAAGTATGAAGAGTGGCAAGCAATTTATGACT
AA

Upstream 100 bases:

>100_bases
CGGACTCCATCGATAAAAGCCATCAACTTTCTCGTCCTGCACGCGGTGCCATAGCGGTTGAACGAGCGTTAAGAGACTAC
CAAGCAGAGGGGAGAGGCTA

Downstream 100 bases:

>100_bases
TTAAAGAGTTAAATAAGGAACTAATTATGTCACGTGACGGCTCGGTGGCTCCTAAAGAGCGAATTAATATCCGTTATGTT
CCAGCAACTGGTGATACGCA

Product: hypothetical protein

Products: NA

Alternate protein names: ImpA Domain-Containing Protein; ImpA-Like; Protein ImpA; Type VI Secretion-Associated Protein Family; Conserved Protein; ImpA-Related Domain-Containing Protein

Number of amino acids: Translated: 533; Mature: 532

Protein sequence:

>533_residues
MSVIDIERLLTPISDAAPVGEDARYEFCYEMMESEVKKFGSLFGETVDWTVVKTHATEVLEQHSKDLKAICYLIRALTEE
FGLQGFEQGLKLLSHALSQFGGELYPSRKRGRDGAVEWLNHQFKLVSSKLVESPQSWALVSSCISTIEEVQRQYDDVYQD
SEADFFEIRTQLNMLSQQAAVDGQSDDGSASEVQPEQAPSVPVSITQPEQTNTAVYSPKPEEAQSAPVKPLSPAPKPAPV
KKAVTQEVYVDTDFSSPTASKRTLKKVAEVMIHANPSDPLAYRIYRHLTWDDIDGLPDHQNNETPLSLAVSSDQQADYRD
KANQESDIDTIKRLERTLTDAPFWLTGHHFVYSMLNNLGFDDAAIAVKQEVKRFVDSLEGIEHLSFKNSIPFADEATLSW
LSTQDAASSTSQPVVQTVVISEEDSLPMEDITLENLGEYAAELARKLELDSSGRGQFMLYLQLIAAYQSVGLYPLCLPYL
EKGWEVQKAFNLASWEPHLSSQLEDLIRKTLHQLFRSKDLLPEKYEEWQAIYD

Sequences:

>Translated_533_residues
MSVIDIERLLTPISDAAPVGEDARYEFCYEMMESEVKKFGSLFGETVDWTVVKTHATEVLEQHSKDLKAICYLIRALTEE
FGLQGFEQGLKLLSHALSQFGGELYPSRKRGRDGAVEWLNHQFKLVSSKLVESPQSWALVSSCISTIEEVQRQYDDVYQD
SEADFFEIRTQLNMLSQQAAVDGQSDDGSASEVQPEQAPSVPVSITQPEQTNTAVYSPKPEEAQSAPVKPLSPAPKPAPV
KKAVTQEVYVDTDFSSPTASKRTLKKVAEVMIHANPSDPLAYRIYRHLTWDDIDGLPDHQNNETPLSLAVSSDQQADYRD
KANQESDIDTIKRLERTLTDAPFWLTGHHFVYSMLNNLGFDDAAIAVKQEVKRFVDSLEGIEHLSFKNSIPFADEATLSW
LSTQDAASSTSQPVVQTVVISEEDSLPMEDITLENLGEYAAELARKLELDSSGRGQFMLYLQLIAAYQSVGLYPLCLPYL
EKGWEVQKAFNLASWEPHLSSQLEDLIRKTLHQLFRSKDLLPEKYEEWQAIYD
>Mature_532_residues
SVIDIERLLTPISDAAPVGEDARYEFCYEMMESEVKKFGSLFGETVDWTVVKTHATEVLEQHSKDLKAICYLIRALTEEF
GLQGFEQGLKLLSHALSQFGGELYPSRKRGRDGAVEWLNHQFKLVSSKLVESPQSWALVSSCISTIEEVQRQYDDVYQDS
EADFFEIRTQLNMLSQQAAVDGQSDDGSASEVQPEQAPSVPVSITQPEQTNTAVYSPKPEEAQSAPVKPLSPAPKPAPVK
KAVTQEVYVDTDFSSPTASKRTLKKVAEVMIHANPSDPLAYRIYRHLTWDDIDGLPDHQNNETPLSLAVSSDQQADYRDK
ANQESDIDTIKRLERTLTDAPFWLTGHHFVYSMLNNLGFDDAAIAVKQEVKRFVDSLEGIEHLSFKNSIPFADEATLSWL
STQDAASSTSQPVVQTVVISEEDSLPMEDITLENLGEYAAELARKLELDSSGRGQFMLYLQLIAAYQSVGLYPLCLPYLE
KGWEVQKAFNLASWEPHLSSQLEDLIRKTLHQLFRSKDLLPEKYEEWQAIYD

Specific function: Unknown

COG id: COG3515

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59945; Mature: 59813

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVIDIERLLTPISDAAPVGEDARYEFCYEMMESEVKKFGSLFGETVDWTVVKTHATEVL
CCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHH
EQHSKDLKAICYLIRALTEEFGLQGFEQGLKLLSHALSQFGGELYPSRKRGRDGAVEWLN
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHHH
HQFKLVSSKLVESPQSWALVSSCISTIEEVQRQYDDVYQDSEADFFEIRTQLNMLSQQAA
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
VDGQSDDGSASEVQPEQAPSVPVSITQPEQTNTAVYSPKPEEAQSAPVKPLSPAPKPAPV
CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEECCCCCHHCCCCCCCCCCCCCCCHH
KKAVTQEVYVDTDFSSPTASKRTLKKVAEVMIHANPSDPLAYRIYRHLTWDDIDGLPDHQ
HHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHCCCCCCCCC
NNETPLSLAVSSDQQADYRDKANQESDIDTIKRLERTLTDAPFWLTGHHFVYSMLNNLGF
CCCCCEEEEECCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHCCC
DDAAIAVKQEVKRFVDSLEGIEHLSFKNSIPFADEATLSWLSTQDAASSTSQPVVQTVVI
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEE
SEEDSLPMEDITLENLGEYAAELARKLELDSSGRGQFMLYLQLIAAYQSVGLYPLCLPYL
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHH
EKGWEVQKAFNLASWEPHLSSQLEDLIRKTLHQLFRSKDLLPEKYEEWQAIYD
HCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
SVIDIERLLTPISDAAPVGEDARYEFCYEMMESEVKKFGSLFGETVDWTVVKTHATEVL
CCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHH
EQHSKDLKAICYLIRALTEEFGLQGFEQGLKLLSHALSQFGGELYPSRKRGRDGAVEWLN
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHHH
HQFKLVSSKLVESPQSWALVSSCISTIEEVQRQYDDVYQDSEADFFEIRTQLNMLSQQAA
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
VDGQSDDGSASEVQPEQAPSVPVSITQPEQTNTAVYSPKPEEAQSAPVKPLSPAPKPAPV
CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEECCCCCHHCCCCCCCCCCCCCCCHH
KKAVTQEVYVDTDFSSPTASKRTLKKVAEVMIHANPSDPLAYRIYRHLTWDDIDGLPDHQ
HHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHCCCCCCCCC
NNETPLSLAVSSDQQADYRDKANQESDIDTIKRLERTLTDAPFWLTGHHFVYSMLNNLGF
CCCCCEEEEECCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHCCC
DDAAIAVKQEVKRFVDSLEGIEHLSFKNSIPFADEATLSWLSTQDAASSTSQPVVQTVVI
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEE
SEEDSLPMEDITLENLGEYAAELARKLELDSSGRGQFMLYLQLIAAYQSVGLYPLCLPYL
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHH
EKGWEVQKAFNLASWEPHLSSQLEDLIRKTLHQLFRSKDLLPEKYEEWQAIYD
HCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA