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The map label for this gene is 156977066

Identifier: 156977066

GI number: 156977066

Start: 1035676

End: 1036467

Strand: Reverse

Name: 156977066

Synonym: VIBHAR_05851

Alternate gene names: NA

Gene position: 1036467-1035676 (Counterclockwise)

Preceding gene: 156977067

Following gene: 156977063

Centisome position: 47.03

GC content: 46.21

Gene sequence:

>792_bases
ATGAGTTATGCAGAAACCGACGTCACCGTAGTCTTATTCCAACCAGAGCCTGGCAAACCGATGGAGGTGATGCCAGCGCC
TGACTTATCTCGTAACATCGCGGTACAAGACTTAAACATTGAAAACATGGGCATCAACCCTTTGGTCGATCAGTTCTCTT
GGTTGATCGCCAGTTTGTCTTGTATGTCCTCAATTCCTTGGCTTGATGACCCAATGCCGTTTCGTGAACAAGTGGCTCGC
GAGATAAGAAAAGGCGAACGTAAGCTCAATGAAATGGAATTGGATCGCGCATCCATTTTGGTCATCCGATACTGTTTGTG
TGCTGCGATTGATGAATCGGTTTGCCGACAAGAGTGGGGCGCTAACAGCCATTGGAGCCAGAACAGTTTGTTGTCCGAGT
TCCACAATGAAACATCTGGCGGCGATAAGTTTTTCGTTATTCTCGAGCGTTTAAAAGCAGACCCGCGCAAATACCGTCAC
GTCATCGAGTTTCTCTATTTGCTGCTTCAACTTGGCTTTCAAGGCAAATACGGCCGTGAAGAGCGTGGTAACGAAAAGCT
CGCAGAAATCGGCAATACCATTTATCGCCTAGTGCGTGACGAACGTTTGGCGGAGCAAGAGAAAGTCTCTCTGGTTAACC
TTAAGGCCAAATACCTCAAGAAACCGTTAAAAAGGGTGATTTCACCCAAACTGATTTTAGGCGTCAGTGCGATCACCTTC
GCAATCATGTATGCCGCGACTTACATCGTTATAGATTTAAAGTTTCAGCAATTGCTTGAAGTGTATCGATAA

Upstream 100 bases:

>100_bases
CAGGCGAAGAGTGGGCGGCACTGAAAAACACGGCTGCGATAGCGGTTCACGTAGCCGGCGACTTTGCTAACTTGTCATTG
CAACTATGGGCTGTTCGTCT

Downstream 100 bases:

>100_bases
ACAGAAGATCTCGAAATGAGATCTTCTGCCAGTTTTAAGCTTTATCGTGGCTTTGTTGCGTAATTCGGACAGAAAACCAA
ATTACCCGAAAATTGAGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: OmpA Family Protein; Outer Membrane Protein; Type VI Secretion System Core Protein; Type VI Secretion System OmpA/MotB Family Protein; DotU Family Type IV/VI Secretion System Protein; SciP Protein; Flagellar Motor Rotation Protein MotB; Type IV/VI Secretion System Protein; DotU Family Type IV / VI Secretion System Protein; OmpA/MotB Domain-Containing Protein; OmpA/MotB Domain Protein; Type VI Secretion System Protein ImpK; OmpA-Family Protein; Type IV / VI Secretion System Protein; Outer Membrane Protein Ompa/Motb Family; T6ss U; OmpA/MotB; Flagellar Motor Protein; Type IV / VI Secretion System Family Protein DotU; Type VI Secretion System VasF

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MSYAETDVTVVLFQPEPGKPMEVMPAPDLSRNIAVQDLNIENMGINPLVDQFSWLIASLSCMSSIPWLDDPMPFREQVAR
EIRKGERKLNEMELDRASILVIRYCLCAAIDESVCRQEWGANSHWSQNSLLSEFHNETSGGDKFFVILERLKADPRKYRH
VIEFLYLLLQLGFQGKYGREERGNEKLAEIGNTIYRLVRDERLAEQEKVSLVNLKAKYLKKPLKRVISPKLILGVSAITF
AIMYAATYIVIDLKFQQLLEVYR

Sequences:

>Translated_263_residues
MSYAETDVTVVLFQPEPGKPMEVMPAPDLSRNIAVQDLNIENMGINPLVDQFSWLIASLSCMSSIPWLDDPMPFREQVAR
EIRKGERKLNEMELDRASILVIRYCLCAAIDESVCRQEWGANSHWSQNSLLSEFHNETSGGDKFFVILERLKADPRKYRH
VIEFLYLLLQLGFQGKYGREERGNEKLAEIGNTIYRLVRDERLAEQEKVSLVNLKAKYLKKPLKRVISPKLILGVSAITF
AIMYAATYIVIDLKFQQLLEVYR
>Mature_262_residues
SYAETDVTVVLFQPEPGKPMEVMPAPDLSRNIAVQDLNIENMGINPLVDQFSWLIASLSCMSSIPWLDDPMPFREQVARE
IRKGERKLNEMELDRASILVIRYCLCAAIDESVCRQEWGANSHWSQNSLLSEFHNETSGGDKFFVILERLKADPRKYRHV
IEFLYLLLQLGFQGKYGREERGNEKLAEIGNTIYRLVRDERLAEQEKVSLVNLKAKYLKKPLKRVISPKLILGVSAITFA
IMYAATYIVIDLKFQQLLEVYR

Specific function: Unknown

COG id: COG3455

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30319; Mature: 30187

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYAETDVTVVLFQPEPGKPMEVMPAPDLSRNIAVQDLNIENMGINPLVDQFSWLIASLS
CCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHH
CMSSIPWLDDPMPFREQVAREIRKGERKLNEMELDRASILVIRYCLCAAIDESVCRQEWG
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ANSHWSQNSLLSEFHNETSGGDKFFVILERLKADPRKYRHVIEFLYLLLQLGFQGKYGRE
CCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCC
ERGNEKLAEIGNTIYRLVRDERLAEQEKVSLVNLKAKYLKKPLKRVISPKLILGVSAITF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
AIMYAATYIVIDLKFQQLLEVYR
HHHHHHHHHHEEHHHHHHHHHHC
>Mature Secondary Structure 
SYAETDVTVVLFQPEPGKPMEVMPAPDLSRNIAVQDLNIENMGINPLVDQFSWLIASLS
CCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHH
CMSSIPWLDDPMPFREQVAREIRKGERKLNEMELDRASILVIRYCLCAAIDESVCRQEWG
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ANSHWSQNSLLSEFHNETSGGDKFFVILERLKADPRKYRHVIEFLYLLLQLGFQGKYGRE
CCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCC
ERGNEKLAEIGNTIYRLVRDERLAEQEKVSLVNLKAKYLKKPLKRVISPKLILGVSAITF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
AIMYAATYIVIDLKFQQLLEVYR
HHHHHHHHHHEEHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA