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The map label for this gene is 156977067

Identifier: 156977067

GI number: 156977067

Start: 1036464

End: 1037789

Strand: Reverse

Name: 156977067

Synonym: VIBHAR_05852

Alternate gene names: NA

Gene position: 1037789-1036464 (Counterclockwise)

Preceding gene: 156977068

Following gene: 156977066

Centisome position: 47.09

GC content: 47.29

Gene sequence:

>1326_bases
ATGTCTTTATACAATCCAGTTGTTTGGCAAGATGGAATGTTCATGAAGCCGCAGCACTTTCAGCAACTCGATCGTTCGCA
AAGTAAACTGTCGAGCATGCTGAGCGCCAATGCGTCGCCTCTACATTGGGGAATTAAGCGTTTAGAGATCAACTCGCAAC
TGCTGGCGTTGGGCAAAATTGGTATTACTCGTGCTGAAGGTATTCTTCAAGACAGAACGCCATTCGAGTTGCCGCTGCTA
GCTGAACTTCCAGAAGTGAAAGACGTTGATCCTTCGATTGCTGACAAGGTGGTTTACCTTTGTTGTCCGCTACCTTCTGA
GCGCTCTGAGCTATTCGGCACTAAGAAAGACGGCGCACGTTACACGATGGAATCTCAAGAGGCGGTTGACGCTTGTTATG
ATTCGGAAGATATGGCAAACATCGTAGTCGGTAAGCTTAACTTCTGTTTGATGTATGACCATGAAGATAAGAGTGCTTAC
ACATCGATTCCAATTCTAAAGATCTCAGAAGTAAAGCCAGACGGCAGTGTCATCTTAGATGAGAGCTTTATCCCGACTTG
TATTGATATCCACGCTTCGACCGTACTGAACAAGTTCGCCACCGAATTCGCATCTATGCTGAAACACCGTGCAGAATCTA
TCGTTCAGCGCTTAGGCGTGGTTGACCAGCAAGGCGTATCTTCGGTTTCTGATTTCATGCTGCTACAAGCCCTAAACCGA
TACGAGCCGCTATTCTGGCACTTTGCAAGCGCTGAAGGGGTTCATCCTGAGTCGTTTTATCGCATTCTTCTTCAGGCGGA
AGGTGAGCTTTCGACTTTGTGTTCAGCGTCTCGTCGTCCAGTCGAGTTCACCAAATACAACCATGGCGACCTAACCAGCT
GTCTATCGCGTACATTGGATAGTGCGAAGATGACACTAAGTGTGATGTCTGAGCAACGTGCAATCCCTCTGACGTTGAGA
GACCAAAACTACGGCATTAGAACGGCAGCGATTCCAGACAGCAAGATCATCGATACCACAACCTTTATTCTTGCGGTTAA
AGCTGATGTTACTTTGGATGTTCTACATACTCAGTTTGTTAGCCAAACGAAGATCGGTTCTATCGATAACATTCGTGACT
TGATTAACCTTCAACTGCCGGGCATCGAGATCAAACCAATGCCAGTTGTACCTCGAGCATTGCCTTACCACGCAGGTTAC
ACCTACTTCGAACTGGATAAGACAGGCGAAGAGTGGGCGGCACTGAAAAACACGGCTGCGATAGCGGTTCACGTAGCCGG
CGACTTTGCTAACTTGTCATTGCAACTATGGGCTGTTCGTCTATGA

Upstream 100 bases:

>100_bases
AGAAGAGCGAGTACTACATCAAACTCAAGTTAGAAGGCAGTGAGTTAATTTCTGACAACACTCGCGGCATTGAACAAGTT
TACTTTTAAGGAATAAAAGC

Downstream 100 bases:

>100_bases
GTTATGCAGAAACCGACGTCACCGTAGTCTTATTCCAACCAGAGCCTGGCAAACCGATGGAGGTGATGCCAGCGCCTGAC
TTATCTCGTAACATCGCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Protein ImpJ/VasE; Conserved Protein; Replication/Virulence Associated Protein; Type VI Secretion System Protein EvpM; Protein ImpJ; Type VI Secretion System Protein ImpJ; Type VI Secretion; Type VI Secretion System Core Protein; T6ss M; Type VI Secretion Protein VasE; Temperature-Dependent Protein Secretion ImpJ

Number of amino acids: Translated: 441; Mature: 440

Protein sequence:

>441_residues
MSLYNPVVWQDGMFMKPQHFQQLDRSQSKLSSMLSANASPLHWGIKRLEINSQLLALGKIGITRAEGILQDRTPFELPLL
AELPEVKDVDPSIADKVVYLCCPLPSERSELFGTKKDGARYTMESQEAVDACYDSEDMANIVVGKLNFCLMYDHEDKSAY
TSIPILKISEVKPDGSVILDESFIPTCIDIHASTVLNKFATEFASMLKHRAESIVQRLGVVDQQGVSSVSDFMLLQALNR
YEPLFWHFASAEGVHPESFYRILLQAEGELSTLCSASRRPVEFTKYNHGDLTSCLSRTLDSAKMTLSVMSEQRAIPLTLR
DQNYGIRTAAIPDSKIIDTTTFILAVKADVTLDVLHTQFVSQTKIGSIDNIRDLINLQLPGIEIKPMPVVPRALPYHAGY
TYFELDKTGEEWAALKNTAAIAVHVAGDFANLSLQLWAVRL

Sequences:

>Translated_441_residues
MSLYNPVVWQDGMFMKPQHFQQLDRSQSKLSSMLSANASPLHWGIKRLEINSQLLALGKIGITRAEGILQDRTPFELPLL
AELPEVKDVDPSIADKVVYLCCPLPSERSELFGTKKDGARYTMESQEAVDACYDSEDMANIVVGKLNFCLMYDHEDKSAY
TSIPILKISEVKPDGSVILDESFIPTCIDIHASTVLNKFATEFASMLKHRAESIVQRLGVVDQQGVSSVSDFMLLQALNR
YEPLFWHFASAEGVHPESFYRILLQAEGELSTLCSASRRPVEFTKYNHGDLTSCLSRTLDSAKMTLSVMSEQRAIPLTLR
DQNYGIRTAAIPDSKIIDTTTFILAVKADVTLDVLHTQFVSQTKIGSIDNIRDLINLQLPGIEIKPMPVVPRALPYHAGY
TYFELDKTGEEWAALKNTAAIAVHVAGDFANLSLQLWAVRL
>Mature_440_residues
SLYNPVVWQDGMFMKPQHFQQLDRSQSKLSSMLSANASPLHWGIKRLEINSQLLALGKIGITRAEGILQDRTPFELPLLA
ELPEVKDVDPSIADKVVYLCCPLPSERSELFGTKKDGARYTMESQEAVDACYDSEDMANIVVGKLNFCLMYDHEDKSAYT
SIPILKISEVKPDGSVILDESFIPTCIDIHASTVLNKFATEFASMLKHRAESIVQRLGVVDQQGVSSVSDFMLLQALNRY
EPLFWHFASAEGVHPESFYRILLQAEGELSTLCSASRRPVEFTKYNHGDLTSCLSRTLDSAKMTLSVMSEQRAIPLTLRD
QNYGIRTAAIPDSKIIDTTTFILAVKADVTLDVLHTQFVSQTKIGSIDNIRDLINLQLPGIEIKPMPVVPRALPYHAGYT
YFELDKTGEEWAALKNTAAIAVHVAGDFANLSLQLWAVRL

Specific function: Unknown

COG id: COG3522

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49162; Mature: 49031

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLYNPVVWQDGMFMKPQHFQQLDRSQSKLSSMLSANASPLHWGIKRLEINSQLLALGKI
CCCCCCEEECCCCEECCHHHHHHHHHHHHHHHHHHCCCCCHHHCCEEEEECCCEEEEHHC
GITRAEGILQDRTPFELPLLAELPEVKDVDPSIADKVVYLCCPLPSERSELFGTKKDGAR
CCHHHCCHHCCCCCCCCCHHHCCCCCCCCCHHHHHCEEEEECCCCCCHHHHCCCCCCCCE
YTMESQEAVDACYDSEDMANIVVGKLNFCLMYDHEDKSAYTSIPILKISEVKPDGSVILD
EEECHHHHHHHHCCCCHHHHHEEECEEEEEEEECCCCCCEEECCEEEEECCCCCCCEEEE
ESFIPTCIDIHASTVLNKFATEFASMLKHRAESIVQRLGVVDQQGVSSVSDFMLLQALNR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
YEPLFWHFASAEGVHPESFYRILLQAEGELSTLCSASRRPVEFTKYNHGDLTSCLSRTLD
CCCEEEEECCCCCCCHHHHHHEEHCCCCCHHHHHHCCCCCEEEEECCCCHHHHHHHHHHH
SAKMTLSVMSEQRAIPLTLRDQNYGIRTAAIPDSKIIDTTTFILAVKADVTLDVLHTQFV
HHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCCCEEEEEEEEEEEECCCCHHHHHHHHH
SQTKIGSIDNIRDLINLQLPGIEIKPMPVVPRALPYHAGYTYFELDKTGEEWAALKNTAA
HHCCCCCHHHHHHHHHEECCCEEECCCCCCCCCCCCCCCCEEEEECCCCHHHHHHCCCEE
IAVHVAGDFANLSLQLWAVRL
EEEEEECCCCCCEEEEEEEEC
>Mature Secondary Structure 
SLYNPVVWQDGMFMKPQHFQQLDRSQSKLSSMLSANASPLHWGIKRLEINSQLLALGKI
CCCCCEEECCCCEECCHHHHHHHHHHHHHHHHHHCCCCCHHHCCEEEEECCCEEEEHHC
GITRAEGILQDRTPFELPLLAELPEVKDVDPSIADKVVYLCCPLPSERSELFGTKKDGAR
CCHHHCCHHCCCCCCCCCHHHCCCCCCCCCHHHHHCEEEEECCCCCCHHHHCCCCCCCCE
YTMESQEAVDACYDSEDMANIVVGKLNFCLMYDHEDKSAYTSIPILKISEVKPDGSVILD
EEECHHHHHHHHCCCCHHHHHEEECEEEEEEEECCCCCCEEECCEEEEECCCCCCCEEEE
ESFIPTCIDIHASTVLNKFATEFASMLKHRAESIVQRLGVVDQQGVSSVSDFMLLQALNR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
YEPLFWHFASAEGVHPESFYRILLQAEGELSTLCSASRRPVEFTKYNHGDLTSCLSRTLD
CCCEEEEECCCCCCCHHHHHHEEHCCCCCHHHHHHCCCCCEEEEECCCCHHHHHHHHHHH
SAKMTLSVMSEQRAIPLTLRDQNYGIRTAAIPDSKIIDTTTFILAVKADVTLDVLHTQFV
HHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCCCEEEEEEEEEEEECCCCHHHHHHHHH
SQTKIGSIDNIRDLINLQLPGIEIKPMPVVPRALPYHAGYTYFELDKTGEEWAALKNTAA
HHCCCCCHHHHHHHHHEECCCEEECCCCCCCCCCCCCCCCEEEEECCCCHHHHHHCCCEE
IAVHVAGDFANLSLQLWAVRL
EEEEEECCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA