| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156977063
Identifier: 156977063
GI number: 156977063
Start: 1033586
End: 1034080
Strand: Reverse
Name: 156977063
Synonym: VIBHAR_05848
Alternate gene names: NA
Gene position: 1034080-1033586 (Counterclockwise)
Preceding gene: 156977066
Following gene: 156977062
Centisome position: 46.92
GC content: 37.17
Gene sequence:
>495_bases GTGACATCCTTGCTTATTAAACCTAATAGGTGTTTTGGGTTTGTTTTTTTATGCTTCCCATTTTTTGTAAATGCAGGTTG CGAACAAGAATCTGTCGTATTCATATGTGATTTAGAAAATAAAGGTGGCAGTTTGAAAGCTTGCTTTAATCAAGCCGAGA ATTCGATGTACTTTGTTGTTGACGAAAATGGGTTGAAAACAGTTTATGCCCCACGACAAGGGAAGAGTTTAGATAACTAT AAATGGATAGATATTTCTCTTGAAGAACCTGAATTCATTCCTTTGAAATTTGAAGTAAATGAAAACAAGAATGCGTACTT TTCATTGACCAGAGGTGGTGGACGGTTGAGTGTCGTTGCGAACTCCGTTGATATGATTGAAGACGAAGCTGCTGTTGAGT ACTTCTGTGAAATGGGAACTGAAACAGCTCTGGATCCTAACGTTAGATTAAAAATAAAGCACGTAAAGCCCAATGAGTTT GAGTCTTGGGATTAA
Upstream 100 bases:
>100_bases TTCATGATGCGTAGCATGATCCTGATTCTATTGAAAATCAAGCAACTTCAATGATCACGGGTATATACGCATGTAAAAAA TTCAGAGTTAAAATTTAAAG
Downstream 100 bases:
>100_bases GCTCACGGATATTTTATATTAGTTAAATAAGCGCCATTCGGCGCTTTTTTACTCTTTACCCCAATACCCATTATCTGGCA CATCAATTAATCGTCTCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MTSLLIKPNRCFGFVFLCFPFFVNAGCEQESVVFICDLENKGGSLKACFNQAENSMYFVVDENGLKTVYAPRQGKSLDNY KWIDISLEEPEFIPLKFEVNENKNAYFSLTRGGGRLSVVANSVDMIEDEAAVEYFCEMGTETALDPNVRLKIKHVKPNEF ESWD
Sequences:
>Translated_164_residues MTSLLIKPNRCFGFVFLCFPFFVNAGCEQESVVFICDLENKGGSLKACFNQAENSMYFVVDENGLKTVYAPRQGKSLDNY KWIDISLEEPEFIPLKFEVNENKNAYFSLTRGGGRLSVVANSVDMIEDEAAVEYFCEMGTETALDPNVRLKIKHVKPNEF ESWD >Mature_163_residues TSLLIKPNRCFGFVFLCFPFFVNAGCEQESVVFICDLENKGGSLKACFNQAENSMYFVVDENGLKTVYAPRQGKSLDNYK WIDISLEEPEFIPLKFEVNENKNAYFSLTRGGGRLSVVANSVDMIEDEAAVEYFCEMGTETALDPNVRLKIKHVKPNEFE SWD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18639; Mature: 18508
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSLLIKPNRCFGFVFLCFPFFVNAGCEQESVVFICDLENKGGSLKACFNQAENSMYFVV CCCEEECCCCCEEHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHCCCCCEEEEE DENGLKTVYAPRQGKSLDNYKWIDISLEEPEFIPLKFEVNENKNAYFSLTRGGGRLSVVA ECCCCEEEECCCCCCCCCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEECCCCEEEEEE NSVDMIEDEAAVEYFCEMGTETALDPNVRLKIKHVKPNEFESWD CCCHHCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCC >Mature Secondary Structure TSLLIKPNRCFGFVFLCFPFFVNAGCEQESVVFICDLENKGGSLKACFNQAENSMYFVV CCEEECCCCCEEHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHCCCCCEEEEE DENGLKTVYAPRQGKSLDNYKWIDISLEEPEFIPLKFEVNENKNAYFSLTRGGGRLSVVA ECCCCEEEECCCCCCCCCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEECCCCEEEEEE NSVDMIEDEAAVEYFCEMGTETALDPNVRLKIKHVKPNEFESWD CCCHHCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA