| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156976979
Identifier: 156976979
GI number: 156976979
Start: 957927
End: 958589
Strand: Reverse
Name: 156976979
Synonym: VIBHAR_05764
Alternate gene names: NA
Gene position: 958589-957927 (Counterclockwise)
Preceding gene: 156976981
Following gene: 156976978
Centisome position: 43.49
GC content: 38.76
Gene sequence:
>663_bases GTGGCTATAATATTGGCGTTTGGAACTGGGCTGCTTTATGTTCTAGGTCAGACATACCATGGAGCATGGCTAAGGACGCT AGGGTTGAGCTCAACCATCTTAGCAAAAGATACGACCGAAATGCTGCAGATAGGTTTTGCTCCATTTTATACTTATGGAC TGTGGGCAATAATAGCAGTTTTCCCATTATTATATCTTCTTACGTTTCTTGCCAAACAGTTCTTTAAATTGCTAGTTTAT TTGTCTCGAAAAAAGGTACCTTCCTGCTACATAGCAGAAATTGATGCTTCAGAGTCACGAGATATTACTACCGAGTCTGC TTCTAGTGGAACTTACGATTATTTTGATTTATTTGATTTTTTTGTTACAGGCCTGTTCTTTGTGTTCTTGGCTGCATTGC TATATACAGTACTTGGTTCCTGGAGAGCGGACTCGGTCATGTCAGATATTATAGAGCGCAAGAGTACCGTATATGAGCTT GAAAATAGAAATTTTGGTATTGTTACTTGCTCTAGCGTTACCTCTCTTTGTGCTATTTATGATTATGGAAATGAAACTAT TGAAATTATTGAACTTTCGAACCTCGCAGGAGCCAGAATAGTCTCTCGACGAACTAATTTGCCCGAGCTAATTGACCAAA TAAGTTCAGAAATGAAGATGTGA
Upstream 100 bases:
>100_bases TCTTTCAATGTGTTTTGTTGCTGTTAGCGAAATTCGTTAATTCCTCCTGAAATTACATATATTTTCAAGGTAATCTTGTG GAAAAAAAATATTTAGAGAT
Downstream 100 bases:
>100_bases AAAATTTTGAAATTGACTTTCAACGCGTGGCATTTGACCACGCGTTTTTCATTTCAGCTACTTGATCCCATATTGCCTTA GACGTAGCCTATGTGCGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MAIILAFGTGLLYVLGQTYHGAWLRTLGLSSTILAKDTTEMLQIGFAPFYTYGLWAIIAVFPLLYLLTFLAKQFFKLLVY LSRKKVPSCYIAEIDASESRDITTESASSGTYDYFDLFDFFVTGLFFVFLAALLYTVLGSWRADSVMSDIIERKSTVYEL ENRNFGIVTCSSVTSLCAIYDYGNETIEIIELSNLAGARIVSRRTNLPELIDQISSEMKM
Sequences:
>Translated_220_residues MAIILAFGTGLLYVLGQTYHGAWLRTLGLSSTILAKDTTEMLQIGFAPFYTYGLWAIIAVFPLLYLLTFLAKQFFKLLVY LSRKKVPSCYIAEIDASESRDITTESASSGTYDYFDLFDFFVTGLFFVFLAALLYTVLGSWRADSVMSDIIERKSTVYEL ENRNFGIVTCSSVTSLCAIYDYGNETIEIIELSNLAGARIVSRRTNLPELIDQISSEMKM >Mature_219_residues AIILAFGTGLLYVLGQTYHGAWLRTLGLSSTILAKDTTEMLQIGFAPFYTYGLWAIIAVFPLLYLLTFLAKQFFKLLVYL SRKKVPSCYIAEIDASESRDITTESASSGTYDYFDLFDFFVTGLFFVFLAALLYTVLGSWRADSVMSDIIERKSTVYELE NRNFGIVTCSSVTSLCAIYDYGNETIEIIELSNLAGARIVSRRTNLPELIDQISSEMKM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24729; Mature: 24598
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIILAFGTGLLYVLGQTYHGAWLRTLGLSSTILAKDTTEMLQIGFAPFYTYGLWAIIAV CEEEEEEHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH FPLLYLLTFLAKQFFKLLVYLSRKKVPSCYIAEIDASESRDITTESASSGTYDYFDLFDF HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHH FVTGLFFVFLAALLYTVLGSWRADSVMSDIIERKSTVYELENRNFGIVTCSSVTSLCAIY HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHH DYGNETIEIIELSNLAGARIVSRRTNLPELIDQISSEMKM HCCCCEEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure AIILAFGTGLLYVLGQTYHGAWLRTLGLSSTILAKDTTEMLQIGFAPFYTYGLWAIIAV EEEEEEHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH FPLLYLLTFLAKQFFKLLVYLSRKKVPSCYIAEIDASESRDITTESASSGTYDYFDLFDF HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHH FVTGLFFVFLAALLYTVLGSWRADSVMSDIIERKSTVYELENRNFGIVTCSSVTSLCAIY HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHH DYGNETIEIIELSNLAGARIVSRRTNLPELIDQISSEMKM HCCCCEEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA