Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156976978

Identifier: 156976978

GI number: 156976978

Start: 957092

End: 957802

Strand: Reverse

Name: 156976978

Synonym: VIBHAR_05763

Alternate gene names: NA

Gene position: 957802-957092 (Counterclockwise)

Preceding gene: 156976979

Following gene: 156976976

Centisome position: 43.46

GC content: 41.07

Gene sequence:

>711_bases
ATGGCTAAGTTTTTAAACACAAGTGCTACAAACTACTACCTCGAAGAGCTAATCAAAAACTCCTCTGAAAGACTGATTCT
CATCAGCCCTTTTCTCAAACTTAATGATCGTATTCGAGAACTTTTAGAAGACAAAGACCGCTTGAAAATCGACATCAGAA
TTGTCTATGGTAAGAGCGAGCTTCAACCCGATGAGATTAACTGGCTCAAAGGACTCTCTTTTGTTCGTACAAGCTTTTGC
AAGAACCTTCATGCTAAGTGTTACATGAACGAAAGCTCGTGCATTATTACAAGCTTGAATCTGTATGAGTTCAGCCAGGT
AAACAACAATGAGATGGGTATTTTCATTGACCGTGATGAAGATGCAGAGATTTACAAAGAGTCTTACGACGAAGCACAGC
GTATCATCCGTATAAGTGACGAGGTTAGAATTTCTCTAGAGAAGGTGCAAGCTGAATCAGCTCCTCCCGAAAGAAGTGAG
CCAGCTGCTAACGTGCAAGAACAAACGAAGATCACCTCTTCTAAGTTAGCTAAAAAGCACAATCTCAAAACTGACGACTT
CCTTAAGCTGTGTGTGACTAAAGGGTACCTATCTTTTGATGATGGAAAACACTCACTAACAGATGAGGGTAAGTCATTTG
GTGGCGAGTTCAAATACAGTAAGCGCTTTGGTCCCTACTTCATTTGGCCAGAGTCACTAGAGGTTGTATAG

Upstream 100 bases:

>100_bases
GCGTGGCATTTGACCACGCGTTTTTCATTTCAGCTACTTGATCCCATATTGCCTTAGACGTAGCCTATGTGCGCTAGGTT
TTATATGTCAAGGATATGAA

Downstream 100 bases:

>100_bases
ATTCAAAAAAGGCTCCACTCGGAGCCTTTTTTATTACACCATATTCTTCAACACTCTCGCATACTTCAGTATTTGGTGAG
CAATTGCCATATCATTCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MAKFLNTSATNYYLEELIKNSSERLILISPFLKLNDRIRELLEDKDRLKIDIRIVYGKSELQPDEINWLKGLSFVRTSFC
KNLHAKCYMNESSCIITSLNLYEFSQVNNNEMGIFIDRDEDAEIYKESYDEAQRIIRISDEVRISLEKVQAESAPPERSE
PAANVQEQTKITSSKLAKKHNLKTDDFLKLCVTKGYLSFDDGKHSLTDEGKSFGGEFKYSKRFGPYFIWPESLEVV

Sequences:

>Translated_236_residues
MAKFLNTSATNYYLEELIKNSSERLILISPFLKLNDRIRELLEDKDRLKIDIRIVYGKSELQPDEINWLKGLSFVRTSFC
KNLHAKCYMNESSCIITSLNLYEFSQVNNNEMGIFIDRDEDAEIYKESYDEAQRIIRISDEVRISLEKVQAESAPPERSE
PAANVQEQTKITSSKLAKKHNLKTDDFLKLCVTKGYLSFDDGKHSLTDEGKSFGGEFKYSKRFGPYFIWPESLEVV
>Mature_235_residues
AKFLNTSATNYYLEELIKNSSERLILISPFLKLNDRIRELLEDKDRLKIDIRIVYGKSELQPDEINWLKGLSFVRTSFCK
NLHAKCYMNESSCIITSLNLYEFSQVNNNEMGIFIDRDEDAEIYKESYDEAQRIIRISDEVRISLEKVQAESAPPERSEP
AANVQEQTKITSSKLAKKHNLKTDDFLKLCVTKGYLSFDDGKHSLTDEGKSFGGEFKYSKRFGPYFIWPESLEVV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27352; Mature: 27221

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKFLNTSATNYYLEELIKNSSERLILISPFLKLNDRIRELLEDKDRLKIDIRIVYGKSE
CCCCCCCCHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHCCCCCEEEEEEEEECCCC
LQPDEINWLKGLSFVRTSFCKNLHAKCYMNESSCIITSLNLYEFSQVNNNEMGIFIDRDE
CCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCEEHHCCCCCCEEEEEECCC
DAEIYKESYDEAQRIIRISDEVRISLEKVQAESAPPERSEPAANVQEQTKITSSKLAKKH
CHHHHHHHHHHHHHHEECCHHHEEHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
NLKTDDFLKLCVTKGYLSFDDGKHSLTDEGKSFGGEFKYSKRFGPYFIWPESLEVV
CCCCHHHHHHHHHCCCEEECCCCCCCCCCHHHCCCCEEECCCCCCEEECCCCCCCC
>Mature Secondary Structure 
AKFLNTSATNYYLEELIKNSSERLILISPFLKLNDRIRELLEDKDRLKIDIRIVYGKSE
CCCCCCCHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHCCCCCEEEEEEEEECCCC
LQPDEINWLKGLSFVRTSFCKNLHAKCYMNESSCIITSLNLYEFSQVNNNEMGIFIDRDE
CCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCEEHHCCCCCCEEEEEECCC
DAEIYKESYDEAQRIIRISDEVRISLEKVQAESAPPERSEPAANVQEQTKITSSKLAKKH
CHHHHHHHHHHHHHHEECCHHHEEHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
NLKTDDFLKLCVTKGYLSFDDGKHSLTDEGKSFGGEFKYSKRFGPYFIWPESLEVV
CCCCHHHHHHHHHCCCEEECCCCCCCCCCHHHCCCCEEECCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA