| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156976952
Identifier: 156976952
GI number: 156976952
Start: 940147
End: 941028
Strand: Direct
Name: 156976952
Synonym: VIBHAR_05737
Alternate gene names: NA
Gene position: 940147-941028 (Clockwise)
Preceding gene: 156976951
Following gene: 156976953
Centisome position: 42.66
GC content: 45.58
Gene sequence:
>882_bases ATGAAAACACTACTTCCTGTAGTTCTATCATTACTGTTATTGAAACCAGTCCATGCAAAGGACTGGTTTCAGTCCAATAC GCCTTTAACTCAAGCGCACCAACATCTGCTAGAGGATGACCTTGGTGGCATGTTCAACTCCCTTGTTGAACTTTGGCAAA GCGAACCCAACAAAGAAACCAGACCACATCTTAATGACTTGCTCGCTCAATCATTATCAAAAGACTGTGGTAAGTCTCTC ACAGGCGTTACGCTTCCAGATTGGATCAGCGGTATTAACGTTATCCGCCAAACCATTCAAAGCCCAGGGCGAGATACCTA TCGACTCGTGGTTAAGCTACGCGCGACAACCGATATCGAAGACATCTCATTTCGTCGTTGGGTTGATGGCTCAATCTCTG CTGATAGCTCCTTCAATTATGAAGAGCCGCAAGAGGGAACTGAGCTGGCTAACGAACGCAACTTCCTTAAACGCTATAAC TTAACCGGTAAGTTAGACGCGGGGTTGTACCATCTCTCTATCACCACAAAAGACAAGCGCACTTATCGCACTTGGGTGAT TTTGGGGGATTCAAACTCATCGCAATACGTTCGTTGGACATCAAAAGAGAATTGGAAAGTAGAAAAGAGCGCACTTCGTA ACCCGCACTGTCCTTTACCGCAATTGGAAGTAGGCTTATACGACTACATCGAAGGCCAATACGATCAAGTGTGGAAAAAG ACCTACGAATCGAACTACCCAAATGCACTCGAACTCGACGGTGTTCCAAACGATCGCTACGTTTTAGCCGTCAGCATTAA CAGTCGCCGTTGGCAAGGGGACATTATTGTGGAGCAAGCTCAAACTATTAGCCGAACTTATGATGTTTCTCTCGAAGAAT AG
Upstream 100 bases:
>100_bases CAGTAGACACACACGTACTGCAGCTTCGTCAAAAACTGCCAGGTCTTGAAATCGAAACGCTTCGTGGCGTTGGCTACAAG ATGAAAGTGTAATCGCAAGA
Downstream 100 bases:
>100_bases CTAAAGAAATGACACTTGTGCCGATATAAGTTCAGGAAGAACGAAAACACAAGTGTAGTATGAAAACACAATACAAAATT CTAGCCACCACGATGACTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MKTLLPVVLSLLLLKPVHAKDWFQSNTPLTQAHQHLLEDDLGGMFNSLVELWQSEPNKETRPHLNDLLAQSLSKDCGKSL TGVTLPDWISGINVIRQTIQSPGRDTYRLVVKLRATTDIEDISFRRWVDGSISADSSFNYEEPQEGTELANERNFLKRYN LTGKLDAGLYHLSITTKDKRTYRTWVILGDSNSSQYVRWTSKENWKVEKSALRNPHCPLPQLEVGLYDYIEGQYDQVWKK TYESNYPNALELDGVPNDRYVLAVSINSRRWQGDIIVEQAQTISRTYDVSLEE
Sequences:
>Translated_293_residues MKTLLPVVLSLLLLKPVHAKDWFQSNTPLTQAHQHLLEDDLGGMFNSLVELWQSEPNKETRPHLNDLLAQSLSKDCGKSL TGVTLPDWISGINVIRQTIQSPGRDTYRLVVKLRATTDIEDISFRRWVDGSISADSSFNYEEPQEGTELANERNFLKRYN LTGKLDAGLYHLSITTKDKRTYRTWVILGDSNSSQYVRWTSKENWKVEKSALRNPHCPLPQLEVGLYDYIEGQYDQVWKK TYESNYPNALELDGVPNDRYVLAVSINSRRWQGDIIVEQAQTISRTYDVSLEE >Mature_293_residues MKTLLPVVLSLLLLKPVHAKDWFQSNTPLTQAHQHLLEDDLGGMFNSLVELWQSEPNKETRPHLNDLLAQSLSKDCGKSL TGVTLPDWISGINVIRQTIQSPGRDTYRLVVKLRATTDIEDISFRRWVDGSISADSSFNYEEPQEGTELANERNFLKRYN LTGKLDAGLYHLSITTKDKRTYRTWVILGDSNSSQYVRWTSKENWKVEKSALRNPHCPLPQLEVGLYDYIEGQYDQVWKK TYESNYPNALELDGVPNDRYVLAVSINSRRWQGDIIVEQAQTISRTYDVSLEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33692; Mature: 33692
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLLPVVLSLLLLKPVHAKDWFQSNTPLTQAHQHLLEDDLGGMFNSLVELWQSEPNKET CCCHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC RPHLNDLLAQSLSKDCGKSLTGVTLPDWISGINVIRQTIQSPGRDTYRLVVKLRATTDIE CHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCC DISFRRWVDGSISADSSFNYEEPQEGTELANERNFLKRYNLTGKLDAGLYHLSITTKDKR HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEECCCEEEEEEEECCCC TYRTWVILGDSNSSQYVRWTSKENWKVEKSALRNPHCPLPQLEVGLYDYIEGQYDQVWKK EEEEEEEEECCCCCCEEEECCCCCCEEHHHHCCCCCCCCCCHHHCHHHHHCCHHHHHHHH TYESNYPNALELDGVPNDRYVLAVSINSRRWQGDIIVEQAQTISRTYDVSLEE HHHCCCCCEEEECCCCCCCEEEEEEECCCCCCCCEEHHHHHHHHHHCCCEECC >Mature Secondary Structure MKTLLPVVLSLLLLKPVHAKDWFQSNTPLTQAHQHLLEDDLGGMFNSLVELWQSEPNKET CCCHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC RPHLNDLLAQSLSKDCGKSLTGVTLPDWISGINVIRQTIQSPGRDTYRLVVKLRATTDIE CHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCC DISFRRWVDGSISADSSFNYEEPQEGTELANERNFLKRYNLTGKLDAGLYHLSITTKDKR HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEECCCEEEEEEEECCCC TYRTWVILGDSNSSQYVRWTSKENWKVEKSALRNPHCPLPQLEVGLYDYIEGQYDQVWKK EEEEEEEEECCCCCCEEEECCCCCCEEHHHHCCCCCCCCCCHHHCHHHHHCCHHHHHHHH TYESNYPNALELDGVPNDRYVLAVSINSRRWQGDIIVEQAQTISRTYDVSLEE HHHCCCCCEEEECCCCCCCEEEEEEECCCCCCCCEEHHHHHHHHHHCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA