| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156976946
Identifier: 156976946
GI number: 156976946
Start: 933697
End: 934149
Strand: Direct
Name: 156976946
Synonym: VIBHAR_05731
Alternate gene names: NA
Gene position: 933697-934149 (Clockwise)
Preceding gene: 156976944
Following gene: 156976947
Centisome position: 42.36
GC content: 41.72
Gene sequence:
>453_bases TTGATTAAATTAAGAGCAATCAACGAGTTGCAGAGCGAGTTCGACTGCTATAATTTCAAGGTGTTGAACAAAGGAGAAAA ATCGATGCAGATCAGTTCAGACGTACACAATTACATGGAAACCTTGGTCGGACAGGTGCTCGCTTCAGACCAATACGTAG ATCAATTCGACAATGAACAACTGGCGGATATCGCGTGTTTAGCTCTGATCCAGCTGAAGCCTGTTTATATTCGTCATGAC ATCGATTTTCTGTCGGCACTCCCAGAACGCAAATTGGCGCAGTTCAAACAAAGTGTTGATGTCGCTGTTGAGAATGCAGC AACAATGATTCAAGAAGACAGACGCAAAAATCGTAACAATGATGTGCCTGTAATTTTGTCGCATACCAGTTATGATGAAG ACAAAGAACTGGATTGGTTCGAAAAACCGATCCTCAACGTCAACATAAAGTAA
Upstream 100 bases:
>100_bases GTAAACAGTATAATTTCAGACGCTTTCAAAACTAACAAGAATACGTGTATTTCGGAATTTTCCAAGTGTTTTACAGCGAA CGCTGACAAAAAGAGAGAGG
Downstream 100 bases:
>100_bases ATGATGTTCGCTACCGTATATAAGAATCAATATACAGAAGAGTGGGCGTCCCCAAGGAGGAACCGTGGGATTCTTTTCGC GCTTGTTTGGTGGCAGTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MIKLRAINELQSEFDCYNFKVLNKGEKSMQISSDVHNYMETLVGQVLASDQYVDQFDNEQLADIACLALIQLKPVYIRHD IDFLSALPERKLAQFKQSVDVAVENAATMIQEDRRKNRNNDVPVILSHTSYDEDKELDWFEKPILNVNIK
Sequences:
>Translated_150_residues MIKLRAINELQSEFDCYNFKVLNKGEKSMQISSDVHNYMETLVGQVLASDQYVDQFDNEQLADIACLALIQLKPVYIRHD IDFLSALPERKLAQFKQSVDVAVENAATMIQEDRRKNRNNDVPVILSHTSYDEDKELDWFEKPILNVNIK >Mature_150_residues MIKLRAINELQSEFDCYNFKVLNKGEKSMQISSDVHNYMETLVGQVLASDQYVDQFDNEQLADIACLALIQLKPVYIRHD IDFLSALPERKLAQFKQSVDVAVENAATMIQEDRRKNRNNDVPVILSHTSYDEDKELDWFEKPILNVNIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17393; Mature: 17393
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKLRAINELQSEFDCYNFKVLNKGEKSMQISSDVHNYMETLVGQVLASDQYVDQFDNEQ CEEEHHHHHHHHHHCHHCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCH LADIACLALIQLKPVYIRHDIDFLSALPERKLAQFKQSVDVAVENAATMIQEDRRKNRNN HHHHHHHHHHHHCCHHEECCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DVPVILSHTSYDEDKELDWFEKPILNVNIK CCCEEEECCCCCCCCCCCHHHCCEEEECCC >Mature Secondary Structure MIKLRAINELQSEFDCYNFKVLNKGEKSMQISSDVHNYMETLVGQVLASDQYVDQFDNEQ CEEEHHHHHHHHHHCHHCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCH LADIACLALIQLKPVYIRHDIDFLSALPERKLAQFKQSVDVAVENAATMIQEDRRKNRNN HHHHHHHHHHHHCCHHEECCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DVPVILSHTSYDEDKELDWFEKPILNVNIK CCCEEEECCCCCCCCCCCHHHCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA