| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156976947
Identifier: 156976947
GI number: 156976947
Start: 934214
End: 934495
Strand: Direct
Name: 156976947
Synonym: VIBHAR_05732
Alternate gene names: NA
Gene position: 934214-934495 (Clockwise)
Preceding gene: 156976946
Following gene: 156976948
Centisome position: 42.39
GC content: 45.39
Gene sequence:
>282_bases GTGGGATTCTTTTCGCGCTTGTTTGGTGGCAGTGATAAAACTGCTGAAGTAAAAACCGTCGAACCTGTCGAGTACAAAGG CTACCTGATCTATCAAGAAAGCCTTTCCGAAGGCGGTCAGTACCGCATTGCTGGACGCATCGAGAAAGACTTCGACGGAG AAGTGAAATCACACCGTTTTATCCGATCGGATTTGTTGGGGTCAGAGCAAGATGCCAACGAGTTGATGTTGAAAAAATCG CAGATGTTTATCGACCAAATGGGTGAAAAGATCTTCGATTAA
Upstream 100 bases:
>100_bases TTCGAAAAACCGATCCTCAACGTCAACATAAAGTAAATGATGTTCGCTACCGTATATAAGAATCAATATACAGAAGAGTG GGCGTCCCCAAGGAGGAACC
Downstream 100 bases:
>100_bases GAAATCACTGCAACTTGATACGAATCATCTTAAAGAGAGCCATTAGTGTATATGCTGATGGCTCTCTTTCTTTTTTAGGC TTAAATATTTGTAAAACAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MGFFSRLFGGSDKTAEVKTVEPVEYKGYLIYQESLSEGGQYRIAGRIEKDFDGEVKSHRFIRSDLLGSEQDANELMLKKS QMFIDQMGEKIFD
Sequences:
>Translated_93_residues MGFFSRLFGGSDKTAEVKTVEPVEYKGYLIYQESLSEGGQYRIAGRIEKDFDGEVKSHRFIRSDLLGSEQDANELMLKKS QMFIDQMGEKIFD >Mature_92_residues GFFSRLFGGSDKTAEVKTVEPVEYKGYLIYQESLSEGGQYRIAGRIEKDFDGEVKSHRFIRSDLLGSEQDANELMLKKSQ MFIDQMGEKIFD
Specific function: Unknown
COG id: COG5453
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10668; Mature: 10537
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFFSRLFGGSDKTAEVKTVEPVEYKGYLIYQESLSEGGQYRIAGRIEKDFDGEVKSHRF CCCHHHHCCCCCCCCEEEECCCCCCCCEEEECCCCCCCCCEEEEECCCCCCCCCHHHHHH IRSDLLGSEQDANELMLKKSQMFIDQMGEKIFD HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GFFSRLFGGSDKTAEVKTVEPVEYKGYLIYQESLSEGGQYRIAGRIEKDFDGEVKSHRF CCHHHHCCCCCCCCEEEECCCCCCCCEEEECCCCCCCCCEEEEECCCCCCCCCHHHHHH IRSDLLGSEQDANELMLKKSQMFIDQMGEKIFD HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA