Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156976842

Identifier: 156976842

GI number: 156976842

Start: 824391

End: 825071

Strand: Direct

Name: 156976842

Synonym: VIBHAR_05618

Alternate gene names: NA

Gene position: 824391-825071 (Clockwise)

Preceding gene: 156976841

Following gene: 156976843

Centisome position: 37.4

GC content: 47.43

Gene sequence:

>681_bases
ATGCAATACAAAGATATCAAATACAGCTTGAAACAAAGCAAGCGGAAAACCACCAGCATTCTTATCGAGCGGGATGGAAG
TGTTACTGTGCTTGCACCTGAAAGCTACGATATGGAAAAAATAGAGAGTATCGTTGAGGAAAAACGGAGCTGGATTTATC
GCAACCTTGCAGAGTGGGAAGATCTTAACCGCACCAAAGTCGAACGTGAGTTCGTGAGTGGTGAGGGCTTCCCCTACCTG
GGCTGCAATTATCGCTTAAAGCTGGTGGACGAGCAGAAAGAAGACTTGATCCTGAAAAATGGTTACTTCCTCATGCGCCG
TGATAAAGCGGAATACGGCAGCGAGCTATTCAAACACTTCTATCGCACCAAAGGGCTATCTCGTATTAGTAAAAGAGTAG
AGCATTTCGCCCCAAAGCTAGGAGTGGATTATCGTGCAATCCGAGTCATGGAGCTTCAGCACCACTGGGCCTCTTGCTCA
CCCAAAGGGGACCTGAACTTTCATTGGCGTTGCCTGATGGCACCGCTCGCAGTGCTGGATTACATCGTAGTGCATGAGCT
TGCTCACCGCATTGAGCGCAACCATAGTGCTGCTTTTTGGAACCTCGTCGACAAAATTATGCCTGATTACCAAAAACATG
TTTCTTGGTTGAAGCACAATGGGGCGGGTATGGATCTTTAG

Upstream 100 bases:

>100_bases
ATTGAGCCGACTTACAATGCCTTTGACGTCAGTTCTAAAAAGGAACTCGAAGAAGTTGTTGAAGAGCGAAAAAAATTGAA
AAAAGAGCAGTTGCACTAAC

Downstream 100 bases:

>100_bases
CTTTGGGTTCAAACTAAGTTGATGATCCAGGAATGAGGTTTGATACTGGGGGGTACATCACGTGATACGCAGTCAGCTTG
TTGTTGCTCAATTCCTCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MQYKDIKYSLKQSKRKTTSILIERDGSVTVLAPESYDMEKIESIVEEKRSWIYRNLAEWEDLNRTKVEREFVSGEGFPYL
GCNYRLKLVDEQKEDLILKNGYFLMRRDKAEYGSELFKHFYRTKGLSRISKRVEHFAPKLGVDYRAIRVMELQHHWASCS
PKGDLNFHWRCLMAPLAVLDYIVVHELAHRIERNHSAAFWNLVDKIMPDYQKHVSWLKHNGAGMDL

Sequences:

>Translated_226_residues
MQYKDIKYSLKQSKRKTTSILIERDGSVTVLAPESYDMEKIESIVEEKRSWIYRNLAEWEDLNRTKVEREFVSGEGFPYL
GCNYRLKLVDEQKEDLILKNGYFLMRRDKAEYGSELFKHFYRTKGLSRISKRVEHFAPKLGVDYRAIRVMELQHHWASCS
PKGDLNFHWRCLMAPLAVLDYIVVHELAHRIERNHSAAFWNLVDKIMPDYQKHVSWLKHNGAGMDL
>Mature_226_residues
MQYKDIKYSLKQSKRKTTSILIERDGSVTVLAPESYDMEKIESIVEEKRSWIYRNLAEWEDLNRTKVEREFVSGEGFPYL
GCNYRLKLVDEQKEDLILKNGYFLMRRDKAEYGSELFKHFYRTKGLSRISKRVEHFAPKLGVDYRAIRVMELQHHWASCS
PKGDLNFHWRCLMAPLAVLDYIVVHELAHRIERNHSAAFWNLVDKIMPDYQKHVSWLKHNGAGMDL

Specific function: Unknown

COG id: COG1451

COG function: function code R; Predicted metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26815; Mature: 26815

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYKDIKYSLKQSKRKTTSILIERDGSVTVLAPESYDMEKIESIVEEKRSWIYRNLAEWE
CCCCHHHHHHHHHHHHHHEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
DLNRTKVEREFVSGEGFPYLGCNYRLKLVDEQKEDLILKNGYFLMRRDKAEYGSELFKHF
HCHHHHHHHHHHCCCCCCEECCCEEEEEECCCCCCEEEECCEEEEECCHHHHHHHHHHHH
YRTKGLSRISKRVEHFAPKLGVDYRAIRVMELQHHWASCSPKGDLNFHWRCLMAPLAVLD
HHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
YIVVHELAHRIERNHSAAFWNLVDKIMPDYQKHVSWLKHNGAGMDL
HHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MQYKDIKYSLKQSKRKTTSILIERDGSVTVLAPESYDMEKIESIVEEKRSWIYRNLAEWE
CCCCHHHHHHHHHHHHHHEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
DLNRTKVEREFVSGEGFPYLGCNYRLKLVDEQKEDLILKNGYFLMRRDKAEYGSELFKHF
HCHHHHHHHHHHCCCCCCEECCCEEEEEECCCCCCEEEECCEEEEECCHHHHHHHHHHHH
YRTKGLSRISKRVEHFAPKLGVDYRAIRVMELQHHWASCSPKGDLNFHWRCLMAPLAVLD
HHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
YIVVHELAHRIERNHSAAFWNLVDKIMPDYQKHVSWLKHNGAGMDL
HHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA