| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156976843
Identifier: 156976843
GI number: 156976843
Start: 825206
End: 825970
Strand: Direct
Name: 156976843
Synonym: VIBHAR_05619
Alternate gene names: NA
Gene position: 825206-825970 (Clockwise)
Preceding gene: 156976842
Following gene: 156976844
Centisome position: 37.44
GC content: 39.74
Gene sequence:
>765_bases ATGAACATTGTCGTTGTACCAAGAGAACAAAGAGTGCCCACAACAGGTATGAATACGGCTTACTTGCATGTTGATCGATG GAATGACTTTTCATTTGTCACTATGTTCTATATGACGGTACTCGATGGTAACGGTAAGAGTCATGATATCGGCCAAGTAA AAATAGGCTTCAAGGGACAAACAATTGAGAAGTCAACATATAAGACATTAAATAACTCGTTCTTAAGTTTACCTGACGGC TATTTTTCTGTAGGTCAAGATGTTGAATACTATAAAAATATGGTTCAACTGCCAGAATCTACGAGGATGGTATTATTTAA AGGGCTGAAAGACATTGCTTTTGACTCTAGCCTTATAGATTTGGCTCAGCACGAGGACGTTTTTCGTACATCTTTGCTTA GAGATGTAAGCTTATCTGTTATCAAAGGGCAGTTTGCTAGAGTGCTTGATGGAAGCAACCCGTTAACCGACTTTGAGTTC AAGTTCGTCAGACCGGTTCAAGAAAAAATGTCCGGTATCGAGTTGAAGTTTAGTGTTAATGTTGGGGACAAACCAACAAC AAATATTCATGCGATTATAGGACGTAACGGGGTCGGGAAAACAACGCTTCTAAACGGAATGATTGAAGCAGTGACCAGTA AAGGACAATCAGTAGCGAAATTCTATGACGTTGAAGGTTGGCGTAATGACCCCATTGATACAGATTATTTCAGTAGTCTC GTATCTGTGTCATTTAGAGAAATGGCCCCCAATTTTCGGACATGA
Upstream 100 bases:
>100_bases GAGGTTTGATACTGGGGGGTACATCACGTGATACGCAGTCAGCTTGTTGTTGCTCAATTCCTCCAATCAAAAATTACAAG GTAAGTAAGAAGGAAAAACA
Downstream 100 bases:
>100_bases CTTTAAGTGATTGATCTGTTTGTATAGTACCTAAAAATACTGGAACAGATTATGACTAGAAAACGTAGAAACCACTCACC CGAATTTAAAGCTAAGGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MNIVVVPREQRVPTTGMNTAYLHVDRWNDFSFVTMFYMTVLDGNGKSHDIGQVKIGFKGQTIEKSTYKTLNNSFLSLPDG YFSVGQDVEYYKNMVQLPESTRMVLFKGLKDIAFDSSLIDLAQHEDVFRTSLLRDVSLSVIKGQFARVLDGSNPLTDFEF KFVRPVQEKMSGIELKFSVNVGDKPTTNIHAIIGRNGVGKTTLLNGMIEAVTSKGQSVAKFYDVEGWRNDPIDTDYFSSL VSVSFREMAPNFRT
Sequences:
>Translated_254_residues MNIVVVPREQRVPTTGMNTAYLHVDRWNDFSFVTMFYMTVLDGNGKSHDIGQVKIGFKGQTIEKSTYKTLNNSFLSLPDG YFSVGQDVEYYKNMVQLPESTRMVLFKGLKDIAFDSSLIDLAQHEDVFRTSLLRDVSLSVIKGQFARVLDGSNPLTDFEF KFVRPVQEKMSGIELKFSVNVGDKPTTNIHAIIGRNGVGKTTLLNGMIEAVTSKGQSVAKFYDVEGWRNDPIDTDYFSSL VSVSFREMAPNFRT >Mature_254_residues MNIVVVPREQRVPTTGMNTAYLHVDRWNDFSFVTMFYMTVLDGNGKSHDIGQVKIGFKGQTIEKSTYKTLNNSFLSLPDG YFSVGQDVEYYKNMVQLPESTRMVLFKGLKDIAFDSSLIDLAQHEDVFRTSLLRDVSLSVIKGQFARVLDGSNPLTDFEF KFVRPVQEKMSGIELKFSVNVGDKPTTNIHAIIGRNGVGKTTLLNGMIEAVTSKGQSVAKFYDVEGWRNDPIDTDYFSSL VSVSFREMAPNFRT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28616; Mature: 28616
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIVVVPREQRVPTTGMNTAYLHVDRWNDFSFVTMFYMTVLDGNGKSHDIGQVKIGFKGQ CEEEEECCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCC TIEKSTYKTLNNSFLSLPDGYFSVGQDVEYYKNMVQLPESTRMVLFKGLKDIAFDSSLID CCCHHHHHHHCCCEEECCCCHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHH LAQHEDVFRTSLLRDVSLSVIKGQFARVLDGSNPLTDFEFKFVRPVQEKMSGIELKFSVN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCEEEEEEEE VGDKPTTNIHAIIGRNGVGKTTLLNGMIEAVTSKGQSVAKFYDVEGWRNDPIDTDYFSSL CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHEEECCCCCCCCCCHHHHHHH VSVSFREMAPNFRT HHHHHHHHCCCCCC >Mature Secondary Structure MNIVVVPREQRVPTTGMNTAYLHVDRWNDFSFVTMFYMTVLDGNGKSHDIGQVKIGFKGQ CEEEEECCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCC TIEKSTYKTLNNSFLSLPDGYFSVGQDVEYYKNMVQLPESTRMVLFKGLKDIAFDSSLID CCCHHHHHHHCCCEEECCCCHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHH LAQHEDVFRTSLLRDVSLSVIKGQFARVLDGSNPLTDFEFKFVRPVQEKMSGIELKFSVN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCEEEEEEEE VGDKPTTNIHAIIGRNGVGKTTLLNGMIEAVTSKGQSVAKFYDVEGWRNDPIDTDYFSSL CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHEEECCCCCCCCCCHHHHHHH VSVSFREMAPNFRT HHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA