Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

Click here to switch to the map view.

The map label for this gene is 156976822

Identifier: 156976822

GI number: 156976822

Start: 799950

End: 800240

Strand: Direct

Name: 156976822

Synonym: VIBHAR_05598

Alternate gene names: NA

Gene position: 799950-800240 (Clockwise)

Preceding gene: 156976821

Following gene: 156976823

Centisome position: 36.3

GC content: 46.74

Gene sequence:

>291_bases
ATGAAGGACACCAAGCGACAAGGAGAGGTTATGCGTGTTCTAAGTAAAACCATCAACGGCGTGTTGTGTTCGCTACTCGT
AGCGTCTGTGTGCGGGCTCGTGGCCATGTATCAAAGTCACACTCAGCAACATCAACAAATTGAACTGCTGCGTGGGCAAC
TGGTGGAAAAAGAAAACCAAATCGTAGTCTCGAATGAGGCATTATCTTACACCCGTTATCAACACCAACTTTTAGCGGAA
GATTACAGCCGTTTCAGAGATGCCCAATCCATGAATAGCGTGCTGCAATAG

Upstream 100 bases:

>100_bases
ACTTTGTTAATGAAACAACCTCAATTGGCTCTCACGGCGTTTTAGAACGTTACGTTCTTAGTCTGTAGACGTCCCAATCA
TTATTGGACTTTACCAAGTA

Downstream 100 bases:

>100_bases
AACAAACGGGCAAGGAGACGCATGAAGTCCATATTGTTGGTTGACGACAGCAAAACGGTTCTGCTCTACATGACCAGTGC
ATTGCAAAAGCAAGGGTACG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MKDTKRQGEVMRVLSKTINGVLCSLLVASVCGLVAMYQSHTQQHQQIELLRGQLVEKENQIVVSNEALSYTRYQHQLLAE
DYSRFRDAQSMNSVLQ

Sequences:

>Translated_96_residues
MKDTKRQGEVMRVLSKTINGVLCSLLVASVCGLVAMYQSHTQQHQQIELLRGQLVEKENQIVVSNEALSYTRYQHQLLAE
DYSRFRDAQSMNSVLQ
>Mature_96_residues
MKDTKRQGEVMRVLSKTINGVLCSLLVASVCGLVAMYQSHTQQHQQIELLRGQLVEKENQIVVSNEALSYTRYQHQLLAE
DYSRFRDAQSMNSVLQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10985; Mature: 10985

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDTKRQGEVMRVLSKTINGVLCSLLVASVCGLVAMYQSHTQQHQQIELLRGQLVEKENQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
IVVSNEALSYTRYQHQLLAEDYSRFRDAQSMNSVLQ
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKDTKRQGEVMRVLSKTINGVLCSLLVASVCGLVAMYQSHTQQHQQIELLRGQLVEKENQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
IVVSNEALSYTRYQHQLLAEDYSRFRDAQSMNSVLQ
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA