Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

Click here to switch to the map view.

The map label for this gene is 156976791

Identifier: 156976791

GI number: 156976791

Start: 769233

End: 769547

Strand: Reverse

Name: 156976791

Synonym: VIBHAR_05566

Alternate gene names: NA

Gene position: 769547-769233 (Counterclockwise)

Preceding gene: 156976793

Following gene: 156976787

Centisome position: 34.92

GC content: 48.89

Gene sequence:

>315_bases
ATGAATACGGTAACTGCAATGAAAAAACGTAACCTTGCCCTCCTCCTTTTCTTGTTCGGTTCAACTGTGAGCTATGCGGG
TGTCATGGATCCAGACTGTGATGCTGAAAAAGCCGCTAAGGCCACAGCGACTAAAGCGGTTGTTGGTGTTGGCGGTCGTT
GTACACCAAAAGAGGCGTTGAAAGACACCACCGTCGATGCAGGTAAAGAAGCCCTACCCGATGATGGACTGGCTGGCAAA
GCGGTAGACGCAGCCATGCCAGAGCAAGAGAAGAAACAACTCAAAAACACAACCAAGAAAGTCATCACGGATTAA

Upstream 100 bases:

>100_bases
AACTTCCGAAAATACAGCAGAAACTCTCAAGTGTCGCGTCGGCGGCACTTTTCTTTTCCTGCAAACTCACCGCTCTCAGT
TACACTTAGTTAATGTTTAC

Downstream 100 bases:

>100_bases
CTTCTGATTGCTGTGAGTATCCGGTTGCTGTGAATAATAGATATATAGCCAATAAAAAGAGCGTCCATCTGGACGCTCTT
TTGTTTTTAGTTCGGAATGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MNTVTAMKKRNLALLLFLFGSTVSYAGVMDPDCDAEKAAKATATKAVVGVGGRCTPKEALKDTTVDAGKEALPDDGLAGK
AVDAAMPEQEKKQLKNTTKKVITD

Sequences:

>Translated_104_residues
MNTVTAMKKRNLALLLFLFGSTVSYAGVMDPDCDAEKAAKATATKAVVGVGGRCTPKEALKDTTVDAGKEALPDDGLAGK
AVDAAMPEQEKKQLKNTTKKVITD
>Mature_104_residues
MNTVTAMKKRNLALLLFLFGSTVSYAGVMDPDCDAEKAAKATATKAVVGVGGRCTPKEALKDTTVDAGKEALPDDGLAGK
AVDAAMPEQEKKQLKNTTKKVITD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10886; Mature: 10886

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTVTAMKKRNLALLLFLFGSTVSYAGVMDPDCDAEKAAKATATKAVVGVGGRCTPKEAL
CCCCHHHHHCCHHHHHHHHHCHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHH
KDTTVDAGKEALPDDGLAGKAVDAAMPEQEKKQLKNTTKKVITD
HHCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNTVTAMKKRNLALLLFLFGSTVSYAGVMDPDCDAEKAAKATATKAVVGVGGRCTPKEAL
CCCCHHHHHCCHHHHHHHHHCHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHH
KDTTVDAGKEALPDDGLAGKAVDAAMPEQEKKQLKNTTKKVITD
HHCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA