| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156976787
Identifier: 156976787
GI number: 156976787
Start: 765914
End: 766375
Strand: Reverse
Name: 156976787
Synonym: VIBHAR_05562
Alternate gene names: NA
Gene position: 766375-765914 (Counterclockwise)
Preceding gene: 156976791
Following gene: 156976786
Centisome position: 34.77
GC content: 46.54
Gene sequence:
>462_bases ATGGGTACACTCAGAACACAACAAGGAAAGTTGACAGTAAGCGCAGTCGCAATAATCATCGCTGTGCTGTTTCAGCTGTA CCTAACGTCTACTGCGGCACTGAACCCTACGCAAATCCACAGCGAAAATTGGCTAAACCAAGTTCAAGATGAAAAGGTGT TGCTGTGTACCGCTGATGGCTTTAAATGGGTGGATATTAACGAACTGATTGAAGCCAACGCACTGCCCAATTCTGAATTT GTTCAAAATCTTAATCTGCACGATGGGTTTCAGTTTGAATGTCCATTATTGCAAGCGGCGCAATTCTTTATCGCTATCGC GTTCGGTCTGTATCTGACCACGCTCTCTTGGTTACGACGCACCAAGCACGTTTTCACACCCTACCATTTCGCAGCTTGCG GAAGAAAAGTTTACAAGTACGTAGCGCCCAAGCAGTCTCCGCCGTGTGTTTTCCACGCCTAA
Upstream 100 bases:
>100_bases AAATAAAACACACTCACATCACCGTTTTATAAACGGATAGTTACAATTTATTATTCGTTTGTTAGTATCGCCGCGTTAAA AATTCTCACTATCGCGTCGT
Downstream 100 bases:
>100_bases ATACTCAACGCAGTAGTCGGTAAATAAACATAACGTATTAATCCTATCGAATAATCGATAGAGAACAGCCAGAATTAAAA AGGAAAACACAAATGATCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MGTLRTQQGKLTVSAVAIIIAVLFQLYLTSTAALNPTQIHSENWLNQVQDEKVLLCTADGFKWVDINELIEANALPNSEF VQNLNLHDGFQFECPLLQAAQFFIAIAFGLYLTTLSWLRRTKHVFTPYHFAACGRKVYKYVAPKQSPPCVFHA
Sequences:
>Translated_153_residues MGTLRTQQGKLTVSAVAIIIAVLFQLYLTSTAALNPTQIHSENWLNQVQDEKVLLCTADGFKWVDINELIEANALPNSEF VQNLNLHDGFQFECPLLQAAQFFIAIAFGLYLTTLSWLRRTKHVFTPYHFAACGRKVYKYVAPKQSPPCVFHA >Mature_152_residues GTLRTQQGKLTVSAVAIIIAVLFQLYLTSTAALNPTQIHSENWLNQVQDEKVLLCTADGFKWVDINELIEANALPNSEFV QNLNLHDGFQFECPLLQAAQFFIAIAFGLYLTTLSWLRRTKHVFTPYHFAACGRKVYKYVAPKQSPPCVFHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17260; Mature: 17129
Theoretical pI: Translated: 7.98; Mature: 7.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTLRTQQGKLTVSAVAIIIAVLFQLYLTSTAALNPTQIHSENWLNQVQDEKVLLCTADG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEECCC FKWVDINELIEANALPNSEFVQNLNLHDGFQFECPLLQAAQFFIAIAFGLYLTTLSWLRR CEEECHHHHHHHCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH TKHVFTPYHFAACGRKVYKYVAPKQSPPCVFHA HHHHCCCHHHHHHHHHHHHHHCCCCCCCEECCC >Mature Secondary Structure GTLRTQQGKLTVSAVAIIIAVLFQLYLTSTAALNPTQIHSENWLNQVQDEKVLLCTADG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEECCC FKWVDINELIEANALPNSEFVQNLNLHDGFQFECPLLQAAQFFIAIAFGLYLTTLSWLRR CEEECHHHHHHHCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH TKHVFTPYHFAACGRKVYKYVAPKQSPPCVFHA HHHHCCCHHHHHHHHHHHHHHCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA