| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156976790
Identifier: 156976790
GI number: 156976790
Start: 768239
End: 769132
Strand: Direct
Name: 156976790
Synonym: VIBHAR_05565
Alternate gene names: NA
Gene position: 768239-769132 (Clockwise)
Preceding gene: 156976789
Following gene: 156976792
Centisome position: 34.86
GC content: 49.33
Gene sequence:
>894_bases GTGGGGATCCCTCAGGGTCTGGCCATCATCTTCGAAGCGGGTAAGTTTTACGCTTGGTATGAATACGGTGAGCGTCGTGC ACACAGAAACTACACCGGGGCCCTCACGGCGTTAGTGTTCTATTTGGTGTTGGCTGCTATTTCTATCGGCGGCAGTATCG GTGGCATCAACAGTGCAACCAACAGTGCTCAACGCCATATCTCGGTAGAACAAGCGAAAGTCGAAGCGTATAACCGCCAG ATTGCGTCCATCGATAAGCAGATTGAGCTAAACAACATGGCGGCGCAAAAGTACATTGAGATGGAGCGCATCGCGACTGG CGTAACGCGCATTCAAGAGCAGAACAAGAAACTACGTGAAGAGCAGCAACGCTTGGCAACAGAGCGAGATAGCTTACCGC CAGTGGCGCAAGGTTCTGTAATTGGTCTGATCGACAGCTTAGCGAAAGCATTTGGAACGACATCTTCACAAGCGCAGTTG GGCTTGGTGGTGTTCTTATCTATCTTGTTGGATTTCTTTGCTGCTTTCTTTTTGGGTTTGATTGGTGAAGAGAACCGCTT CCGTCATTTCTTCCGTCGTAACGATGGTATAACGCTAGCAAACGTTCGAGATATTGAGCCGGAGCCAGCAGGATACCTAC CTCATATCAAAGAGGAAGCTGAGCCGGAAGCGCAACAAGAGCTTGAGCCAGAAGAGCCCAAAACATTATTAGAGCAGGTG AGCGATGCGTTAAAAGGTCACCAAATCACTTGCACTAAAAAGGCAGTAGCCAAACAGTTCAGGCTCTCGGCAGAAGAGGT CGACAAAGTGTTTGAAGAACTAGCCGAACTTGGCTTAGTCGGTAAGAAAGCCAACCACCATTACCACTGGATTGGTCAAA CCGAAGCGGCTTAA
Upstream 100 bases:
>100_bases GTTGATAGGAAGAGAAGCTTACTCATTTAGCGTGAAGGATCTGGCCTTAGCCGTAGGAGGCCTCAAAGCGATAAGTGCGG CAGAGTTCCGGTGAAAAGAT
Downstream 100 bases:
>100_bases GCATTCCGAACTAAAAACAAAAGAGCGTCCAGATGGACGCTCTTTTTATTGGCTATATATCTATTATTCACAGCAACCGG ATACTCACAGCAATCAGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MGIPQGLAIIFEAGKFYAWYEYGERRAHRNYTGALTALVFYLVLAAISIGGSIGGINSATNSAQRHISVEQAKVEAYNRQ IASIDKQIELNNMAAQKYIEMERIATGVTRIQEQNKKLREEQQRLATERDSLPPVAQGSVIGLIDSLAKAFGTTSSQAQL GLVVFLSILLDFFAAFFLGLIGEENRFRHFFRRNDGITLANVRDIEPEPAGYLPHIKEEAEPEAQQELEPEEPKTLLEQV SDALKGHQITCTKKAVAKQFRLSAEEVDKVFEELAELGLVGKKANHHYHWIGQTEAA
Sequences:
>Translated_297_residues MGIPQGLAIIFEAGKFYAWYEYGERRAHRNYTGALTALVFYLVLAAISIGGSIGGINSATNSAQRHISVEQAKVEAYNRQ IASIDKQIELNNMAAQKYIEMERIATGVTRIQEQNKKLREEQQRLATERDSLPPVAQGSVIGLIDSLAKAFGTTSSQAQL GLVVFLSILLDFFAAFFLGLIGEENRFRHFFRRNDGITLANVRDIEPEPAGYLPHIKEEAEPEAQQELEPEEPKTLLEQV SDALKGHQITCTKKAVAKQFRLSAEEVDKVFEELAELGLVGKKANHHYHWIGQTEAA >Mature_296_residues GIPQGLAIIFEAGKFYAWYEYGERRAHRNYTGALTALVFYLVLAAISIGGSIGGINSATNSAQRHISVEQAKVEAYNRQI ASIDKQIELNNMAAQKYIEMERIATGVTRIQEQNKKLREEQQRLATERDSLPPVAQGSVIGLIDSLAKAFGTTSSQAQLG LVVFLSILLDFFAAFFLGLIGEENRFRHFFRRNDGITLANVRDIEPEPAGYLPHIKEEAEPEAQQELEPEEPKTLLEQVS DALKGHQITCTKKAVAKQFRLSAEEVDKVFEELAELGLVGKKANHHYHWIGQTEAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33085; Mature: 32954
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIPQGLAIIFEAGKFYAWYEYGERRAHRNYTGALTALVFYLVLAAISIGGSIGGINSAT CCCCHHHHHEECCCCEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH NSAQRHISVEQAKVEAYNRQIASIDKQIELNNMAAQKYIEMERIATGVTRIQEQNKKLRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQQRLATERDSLPPVAQGSVIGLIDSLAKAFGTTSSQAQLGLVVFLSILLDFFAAFFLGL HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH IGEENRFRHFFRRNDGITLANVRDIEPEPAGYLPHIKEEAEPEAQQELEPEEPKTLLEQV HCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHCCCCHHHCCCCCCHHHHHHHH SDALKGHQITCTKKAVAKQFRLSAEEVDKVFEELAELGLVGKKANHHYHWIGQTEAA HHHHCCCEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCC >Mature Secondary Structure GIPQGLAIIFEAGKFYAWYEYGERRAHRNYTGALTALVFYLVLAAISIGGSIGGINSAT CCCHHHHHEECCCCEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH NSAQRHISVEQAKVEAYNRQIASIDKQIELNNMAAQKYIEMERIATGVTRIQEQNKKLRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQQRLATERDSLPPVAQGSVIGLIDSLAKAFGTTSSQAQLGLVVFLSILLDFFAAFFLGL HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH IGEENRFRHFFRRNDGITLANVRDIEPEPAGYLPHIKEEAEPEAQQELEPEEPKTLLEQV HCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHCCCCHHHCCCCCCHHHHHHHH SDALKGHQITCTKKAVAKQFRLSAEEVDKVFEELAELGLVGKKANHHYHWIGQTEAA HHHHCCCEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA