| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156976789
Identifier: 156976789
GI number: 156976789
Start: 767039
End: 768232
Strand: Direct
Name: 156976789
Synonym: VIBHAR_05564
Alternate gene names: NA
Gene position: 767039-768232 (Clockwise)
Preceding gene: 156976788
Following gene: 156976790
Centisome position: 34.8
GC content: 44.97
Gene sequence:
>1194_bases ATGAACCTATCCACCATCCTGAATACTTTTTTCTTAATGTCATCGTTCTCCGCTATCAAAGATAAAAGACGTATCACAGC CGTTCTTGACTGTATCAATGCACTTAACGAGAAAGACACATTAACCTTGACCGGGCTTGGTCGAGGGATGAAAAATACCA AAACTAAGGTAAAGCACTGTATTAAGAGGGTCTGTCGCCTGCTAGGCAACCCACATCTACATCGTGAGCGTACCGGTGTT TATGCATACATAACCGACTTCCTACTCAAAAATGTAAAGCACCCTATCATTATCGTTGATTGGTCACCGGTGAATCACGT GGACAAGCAAATCCTACGAGCAACGATTCCCATTGGAGGCCGAGCCTTCACACTGTATGAAGAAGTTCACCCAGAGTGCA AACTTGGCTCGTTAGCTGTTCACAAAGCTTTCATTCGACGTTTAGCCACTATGGTTCCCAAAGGGGTTATTCCCATCGTT ACCACTGATGCTGGGTTTAAAGTGCCTTGGTTCAAACCTATTGAACAACAAGGCTGGTATTGGCTAGGTCGCGTACGAGG CAACAGCAAGCTTAGGGTAAATGACCGCTGGTGCAGTGCAGATGAAGTTTTTGTTCAAGCGCAATATAAGCCCCAGCATT TGGGAACAGCAGAGTTAACTAAGCAGCATCAATACCCTTGTCAAGTATGTCTCTACAGAAAGAAGTCCAAGGGGCGTAAA GCTAAAAACTGGAGTGGTTCTCTCCAGAGAAATACGGTGAGCTTATCCCATGCCAAAGGTGAAAGAGAGCCATGGTTGCT CGTCTCTAATCTACCGGGAGAAACCTGGTTTGCAGAGCGTGTCGTAGCCCTATATACCCAACGGATGTCAATTGAAGAGG GCTTTCGAGATACTAAAAATGAACGTTATGGGTTGGCTCTTAACTTCAGTGGTAGTGCAAGTCCCAAGCGTATTGAGATC TTATTGATGATAGGCATGTTGACTCAATTTGCTTTGTTGGTAGTAGGTAAAGTCGCTTATCTCAAAGGTTACTACAAGGA TTTTCAAGCAAATACCATTCGAACACGCCGGGTACTTTTCCTACTTTTTCTCGGTAAAGAGTTGATAGGAAGAGAAGCTT ACTCATTTAGCGTGAAGGATCTGGCCTTAGCCGTAGGAGGCCTCAAAGCGATAAGTGCGGCAGAGTTCCGGTGA
Upstream 100 bases:
>100_bases ACTAGCATAGAAGAATCATGTAGATAGCGTGAAAAGTAGGCAGATTCATTTTGATCGGCGATTATAGCATCAATTGAAAA GATATGACCCGACGAGTCTC
Downstream 100 bases:
>100_bases AAAGATGTGGGGATCCCTCAGGGTCTGGCCATCATCTTCGAAGCGGGTAAGTTTTACGCTTGGTATGAATACGGTGAGCG TCGTGCACACAGAAACTACA
Product: hypothetical protein
Products: NA
Alternate protein names: Transposase; Transposase For IS; ISxac1 Transposase; IS10 Orf; ISCro2 Transposase; Transposase IS; IS4 Family Transposase; ISSfl3 ORF
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MNLSTILNTFFLMSSFSAIKDKRRITAVLDCINALNEKDTLTLTGLGRGMKNTKTKVKHCIKRVCRLLGNPHLHRERTGV YAYITDFLLKNVKHPIIIVDWSPVNHVDKQILRATIPIGGRAFTLYEEVHPECKLGSLAVHKAFIRRLATMVPKGVIPIV TTDAGFKVPWFKPIEQQGWYWLGRVRGNSKLRVNDRWCSADEVFVQAQYKPQHLGTAELTKQHQYPCQVCLYRKKSKGRK AKNWSGSLQRNTVSLSHAKGEREPWLLVSNLPGETWFAERVVALYTQRMSIEEGFRDTKNERYGLALNFSGSASPKRIEI LLMIGMLTQFALLVVGKVAYLKGYYKDFQANTIRTRRVLFLLFLGKELIGREAYSFSVKDLALAVGGLKAISAAEFR
Sequences:
>Translated_397_residues MNLSTILNTFFLMSSFSAIKDKRRITAVLDCINALNEKDTLTLTGLGRGMKNTKTKVKHCIKRVCRLLGNPHLHRERTGV YAYITDFLLKNVKHPIIIVDWSPVNHVDKQILRATIPIGGRAFTLYEEVHPECKLGSLAVHKAFIRRLATMVPKGVIPIV TTDAGFKVPWFKPIEQQGWYWLGRVRGNSKLRVNDRWCSADEVFVQAQYKPQHLGTAELTKQHQYPCQVCLYRKKSKGRK AKNWSGSLQRNTVSLSHAKGEREPWLLVSNLPGETWFAERVVALYTQRMSIEEGFRDTKNERYGLALNFSGSASPKRIEI LLMIGMLTQFALLVVGKVAYLKGYYKDFQANTIRTRRVLFLLFLGKELIGREAYSFSVKDLALAVGGLKAISAAEFR >Mature_397_residues MNLSTILNTFFLMSSFSAIKDKRRITAVLDCINALNEKDTLTLTGLGRGMKNTKTKVKHCIKRVCRLLGNPHLHRERTGV YAYITDFLLKNVKHPIIIVDWSPVNHVDKQILRATIPIGGRAFTLYEEVHPECKLGSLAVHKAFIRRLATMVPKGVIPIV TTDAGFKVPWFKPIEQQGWYWLGRVRGNSKLRVNDRWCSADEVFVQAQYKPQHLGTAELTKQHQYPCQVCLYRKKSKGRK AKNWSGSLQRNTVSLSHAKGEREPWLLVSNLPGETWFAERVVALYTQRMSIEEGFRDTKNERYGLALNFSGSASPKRIEI LLMIGMLTQFALLVVGKVAYLKGYYKDFQANTIRTRRVLFLLFLGKELIGREAYSFSVKDLALAVGGLKAISAAEFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45147; Mature: 45147
Theoretical pI: Translated: 10.60; Mature: 10.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLSTILNTFFLMSSFSAIKDKRRITAVLDCINALNEKDTLTLTGLGRGMKNTKTKVKHC CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHH IKRVCRLLGNPHLHRERTGVYAYITDFLLKNVKHPIIIVDWSPVNHVDKQILRATIPIGG HHHHHHHHCCCCCCHHHCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCC RAFTLYEEVHPECKLGSLAVHKAFIRRLATMVPKGVIPIVTTDAGFKVPWFKPIEQQGWY EEEEEHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCE WLGRVRGNSKLRVNDRWCSADEVFVQAQYKPQHLGTAELTKQHQYPCQVCLYRKKSKGRK EEEEEECCCEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHCCCCCHHHHHHHHHCCCCC AKNWSGSLQRNTVSLSHAKGEREPWLLVSNLPGETWFAERVVALYTQRMSIEEGFRDTKN CCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC ERYGLALNFSGSASPKRIEILLMIGMLTQFALLVVGKVAYLKGYYKDFQANTIRTRRVLF CCEEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LLFLGKELIGREAYSFSVKDLALAVGGLKAISAAEFR HHHHHHHHHCCCHHEEHHHHHHHHHHCHHHHHHCCCC >Mature Secondary Structure MNLSTILNTFFLMSSFSAIKDKRRITAVLDCINALNEKDTLTLTGLGRGMKNTKTKVKHC CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHH IKRVCRLLGNPHLHRERTGVYAYITDFLLKNVKHPIIIVDWSPVNHVDKQILRATIPIGG HHHHHHHHCCCCCCHHHCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCC RAFTLYEEVHPECKLGSLAVHKAFIRRLATMVPKGVIPIVTTDAGFKVPWFKPIEQQGWY EEEEEHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCE WLGRVRGNSKLRVNDRWCSADEVFVQAQYKPQHLGTAELTKQHQYPCQVCLYRKKSKGRK EEEEEECCCEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHCCCCCHHHHHHHHHCCCCC AKNWSGSLQRNTVSLSHAKGEREPWLLVSNLPGETWFAERVVALYTQRMSIEEGFRDTKN CCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC ERYGLALNFSGSASPKRIEILLMIGMLTQFALLVVGKVAYLKGYYKDFQANTIRTRRVLF CCEEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LLFLGKELIGREAYSFSVKDLALAVGGLKAISAAEFR HHHHHHHHHCCCHHEEHHHHHHHHHHCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA