Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is sspA [C]

Identifier: 156976759

GI number: 156976759

Start: 740486

End: 741133

Strand: Direct

Name: sspA [C]

Synonym: VIBHAR_05534

Alternate gene names: 156976759

Gene position: 740486-741133 (Clockwise)

Preceding gene: 156976757

Following gene: 156976760

Centisome position: 33.6

GC content: 45.22

Gene sequence:

>648_bases
ATGAAACTGTTTATTGCTAACCAAAACTACTCGAGCTGGTCACTGCGCGCATGGCTGATCTTTTCTCAATTCAAATTGGA
TGTGGAAGTCACCAAGCTCAAGTTATTCACGGAAGATTTTTACAAAACCTTGGAATGTATTACACCAACCGCGAAAGTAC
CTACATTGGTGGATGGTGACGCAACCGTGTGGGATTCATTAGCGATTTTGGAGTACGTTAACGAGCAGTACTTGCAAGGT
AGAGCATGGCCAAGTAAGTCTGCAGAACGGGCTAAAGCACGCGCCATCGCTTCAGAAATGCATTCGGGTTTCTTTGATTT
AAGAAACGAACTCCCAATGAATATCTGCGCGCGCAGAAAAGTCGATTTAACTGAAGGTGCGCGTAAGGATATTGCGCGTA
TTGATGCTATTTGGACAGAGCAAGCAAAGCAGTATCCGAACGGGTGGCTATTTGGAGAATGGTCTATCGCCGATGCCATG
TATGCACCTGTGGCATTGCGCTTCCAAACTTATGGCATCGAGTTATCGGAAGGTGCCAAAGCTTACCAACAAAAGGTGCT
AGCAAGTGAATCTTTACAGCAATGGTTGGAAGAGGCGAACCAAGAAACGGATATCGTAGAAGAAGATGAAGCAGGGGTAG
AAGTTTAA

Upstream 100 bases:

>100_bases
GTTTTTGTTGAAGTGTTCCATCAAAACTATCCGTTAGTCCCCTTAAATACAATCAGATATTGTGAATGGGTACTCAAAAC
ACGAACCGCATGGGGGCGTC

Downstream 100 bases:

>100_bases
CGGTACTAGAGCCTCACTTGATGGGAGGCTCTATTCAAAAATACCTTATTTACTTTTCATACATTGAAGTACTTCTGTTC
GCTCGAAATGATTTTCTTCT

Product: glutathione S-transferase

Products: NA

Alternate protein names: Glutathione S-Transferase Domain-Containing Protein; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase Family Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase-Like; Glutathione-S-Transferase Protein; Glutathione S-Transferase Protein; Glutathione S-Transferase N-Terminal Domain Protein; Glutathione S-Transferase Domain; Glutathione S-Transferase N-Terminal Domain-Containing; Maleylacetoacetate Isomerase; Stringent Starvation Protein A; GSH-Dependent Dehydroascorbate Reductase; Glutathione S-Transferase N-Terminal; Glutathione-S-Tranferase Family Protein

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MKLFIANQNYSSWSLRAWLIFSQFKLDVEVTKLKLFTEDFYKTLECITPTAKVPTLVDGDATVWDSLAILEYVNEQYLQG
RAWPSKSAERAKARAIASEMHSGFFDLRNELPMNICARRKVDLTEGARKDIARIDAIWTEQAKQYPNGWLFGEWSIADAM
YAPVALRFQTYGIELSEGAKAYQQKVLASESLQQWLEEANQETDIVEEDEAGVEV

Sequences:

>Translated_215_residues
MKLFIANQNYSSWSLRAWLIFSQFKLDVEVTKLKLFTEDFYKTLECITPTAKVPTLVDGDATVWDSLAILEYVNEQYLQG
RAWPSKSAERAKARAIASEMHSGFFDLRNELPMNICARRKVDLTEGARKDIARIDAIWTEQAKQYPNGWLFGEWSIADAM
YAPVALRFQTYGIELSEGAKAYQQKVLASESLQQWLEEANQETDIVEEDEAGVEV
>Mature_215_residues
MKLFIANQNYSSWSLRAWLIFSQFKLDVEVTKLKLFTEDFYKTLECITPTAKVPTLVDGDATVWDSLAILEYVNEQYLQG
RAWPSKSAERAKARAIASEMHSGFFDLRNELPMNICARRKVDLTEGARKDIARIDAIWTEQAKQYPNGWLFGEWSIADAM
YAPVALRFQTYGIELSEGAKAYQQKVLASESLQQWLEEANQETDIVEEDEAGVEV

Specific function: Forms An Equimolar Complex With The RNA Polymerase Holoenzyme (Rnap) But Not With The Core Enzyme. It Is Synthesized Predominantly When Cells Are Exposed To Amino Acid Starvation, At Which Time It Accounts For Over 50% Of The Total Protein Synthesized. It

COG id: COG0625

COG function: function code O; Glutathione S-transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1982 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24591; Mature: 24591

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLFIANQNYSSWSLRAWLIFSQFKLDVEVTKLKLFTEDFYKTLECITPTAKVPTLVDGD
CEEEEECCCCCCCCCEEEEEEEHHEECEEEHHHHHHHHHHHHHHHHCCCCCCCCEEECCC
ATVWDSLAILEYVNEQYLQGRAWPSKSAERAKARAIASEMHSGFFDLRNELPMNICARRK
CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
VDLTEGARKDIARIDAIWTEQAKQYPNGWLFGEWSIADAMYAPVALRFQTYGIELSEGAK
CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHCCEEEEEEEECEEHHHHHH
AYQQKVLASESLQQWLEEANQETDIVEEDEAGVEV
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKLFIANQNYSSWSLRAWLIFSQFKLDVEVTKLKLFTEDFYKTLECITPTAKVPTLVDGD
CEEEEECCCCCCCCCEEEEEEEHHEECEEEHHHHHHHHHHHHHHHHCCCCCCCCEEECCC
ATVWDSLAILEYVNEQYLQGRAWPSKSAERAKARAIASEMHSGFFDLRNELPMNICARRK
CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
VDLTEGARKDIARIDAIWTEQAKQYPNGWLFGEWSIADAMYAPVALRFQTYGIELSEGAK
CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHCCEEEEEEEECEEHHHHHH
AYQQKVLASESLQQWLEEANQETDIVEEDEAGVEV
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA