| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is sspA [C]
Identifier: 156976759
GI number: 156976759
Start: 740486
End: 741133
Strand: Direct
Name: sspA [C]
Synonym: VIBHAR_05534
Alternate gene names: 156976759
Gene position: 740486-741133 (Clockwise)
Preceding gene: 156976757
Following gene: 156976760
Centisome position: 33.6
GC content: 45.22
Gene sequence:
>648_bases ATGAAACTGTTTATTGCTAACCAAAACTACTCGAGCTGGTCACTGCGCGCATGGCTGATCTTTTCTCAATTCAAATTGGA TGTGGAAGTCACCAAGCTCAAGTTATTCACGGAAGATTTTTACAAAACCTTGGAATGTATTACACCAACCGCGAAAGTAC CTACATTGGTGGATGGTGACGCAACCGTGTGGGATTCATTAGCGATTTTGGAGTACGTTAACGAGCAGTACTTGCAAGGT AGAGCATGGCCAAGTAAGTCTGCAGAACGGGCTAAAGCACGCGCCATCGCTTCAGAAATGCATTCGGGTTTCTTTGATTT AAGAAACGAACTCCCAATGAATATCTGCGCGCGCAGAAAAGTCGATTTAACTGAAGGTGCGCGTAAGGATATTGCGCGTA TTGATGCTATTTGGACAGAGCAAGCAAAGCAGTATCCGAACGGGTGGCTATTTGGAGAATGGTCTATCGCCGATGCCATG TATGCACCTGTGGCATTGCGCTTCCAAACTTATGGCATCGAGTTATCGGAAGGTGCCAAAGCTTACCAACAAAAGGTGCT AGCAAGTGAATCTTTACAGCAATGGTTGGAAGAGGCGAACCAAGAAACGGATATCGTAGAAGAAGATGAAGCAGGGGTAG AAGTTTAA
Upstream 100 bases:
>100_bases GTTTTTGTTGAAGTGTTCCATCAAAACTATCCGTTAGTCCCCTTAAATACAATCAGATATTGTGAATGGGTACTCAAAAC ACGAACCGCATGGGGGCGTC
Downstream 100 bases:
>100_bases CGGTACTAGAGCCTCACTTGATGGGAGGCTCTATTCAAAAATACCTTATTTACTTTTCATACATTGAAGTACTTCTGTTC GCTCGAAATGATTTTCTTCT
Product: glutathione S-transferase
Products: NA
Alternate protein names: Glutathione S-Transferase Domain-Containing Protein; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase Family Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase-Like; Glutathione-S-Transferase Protein; Glutathione S-Transferase Protein; Glutathione S-Transferase N-Terminal Domain Protein; Glutathione S-Transferase Domain; Glutathione S-Transferase N-Terminal Domain-Containing; Maleylacetoacetate Isomerase; Stringent Starvation Protein A; GSH-Dependent Dehydroascorbate Reductase; Glutathione S-Transferase N-Terminal; Glutathione-S-Tranferase Family Protein
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MKLFIANQNYSSWSLRAWLIFSQFKLDVEVTKLKLFTEDFYKTLECITPTAKVPTLVDGDATVWDSLAILEYVNEQYLQG RAWPSKSAERAKARAIASEMHSGFFDLRNELPMNICARRKVDLTEGARKDIARIDAIWTEQAKQYPNGWLFGEWSIADAM YAPVALRFQTYGIELSEGAKAYQQKVLASESLQQWLEEANQETDIVEEDEAGVEV
Sequences:
>Translated_215_residues MKLFIANQNYSSWSLRAWLIFSQFKLDVEVTKLKLFTEDFYKTLECITPTAKVPTLVDGDATVWDSLAILEYVNEQYLQG RAWPSKSAERAKARAIASEMHSGFFDLRNELPMNICARRKVDLTEGARKDIARIDAIWTEQAKQYPNGWLFGEWSIADAM YAPVALRFQTYGIELSEGAKAYQQKVLASESLQQWLEEANQETDIVEEDEAGVEV >Mature_215_residues MKLFIANQNYSSWSLRAWLIFSQFKLDVEVTKLKLFTEDFYKTLECITPTAKVPTLVDGDATVWDSLAILEYVNEQYLQG RAWPSKSAERAKARAIASEMHSGFFDLRNELPMNICARRKVDLTEGARKDIARIDAIWTEQAKQYPNGWLFGEWSIADAM YAPVALRFQTYGIELSEGAKAYQQKVLASESLQQWLEEANQETDIVEEDEAGVEV
Specific function: Forms An Equimolar Complex With The RNA Polymerase Holoenzyme (Rnap) But Not With The Core Enzyme. It Is Synthesized Predominantly When Cells Are Exposed To Amino Acid Starvation, At Which Time It Accounts For Over 50% Of The Total Protein Synthesized. It
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1982 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24591; Mature: 24591
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLFIANQNYSSWSLRAWLIFSQFKLDVEVTKLKLFTEDFYKTLECITPTAKVPTLVDGD CEEEEECCCCCCCCCEEEEEEEHHEECEEEHHHHHHHHHHHHHHHHCCCCCCCCEEECCC ATVWDSLAILEYVNEQYLQGRAWPSKSAERAKARAIASEMHSGFFDLRNELPMNICARRK CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC VDLTEGARKDIARIDAIWTEQAKQYPNGWLFGEWSIADAMYAPVALRFQTYGIELSEGAK CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHCCEEEEEEEECEEHHHHHH AYQQKVLASESLQQWLEEANQETDIVEEDEAGVEV HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKLFIANQNYSSWSLRAWLIFSQFKLDVEVTKLKLFTEDFYKTLECITPTAKVPTLVDGD CEEEEECCCCCCCCCEEEEEEEHHEECEEEHHHHHHHHHHHHHHHHCCCCCCCCEEECCC ATVWDSLAILEYVNEQYLQGRAWPSKSAERAKARAIASEMHSGFFDLRNELPMNICARRK CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC VDLTEGARKDIARIDAIWTEQAKQYPNGWLFGEWSIADAMYAPVALRFQTYGIELSEGAK CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHCCEEEEEEEECEEHHHHHH AYQQKVLASESLQQWLEEANQETDIVEEDEAGVEV HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA