Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156976727

Identifier: 156976727

GI number: 156976727

Start: 712020

End: 713009

Strand: Direct

Name: 156976727

Synonym: VIBHAR_05502

Alternate gene names: NA

Gene position: 712020-713009 (Clockwise)

Preceding gene: 156976726

Following gene: 156976728

Centisome position: 32.31

GC content: 47.37

Gene sequence:

>990_bases
ATGTACCAACAACGGATTGTGATTGATGGATTGCAGTACTGCAATTGGGATAGAGAGTACTTTCAGACACTAAAAGCCAG
CGGCATCACCGCTGTTCATGCAACGATCGTTTATCACGAAAATGCACGAGAAACGTTAACCCGCTTTGCTGAATGGAATC
TTCGCTTCGAGCAAAACGCAGACCTCATCATGCCAATTTATTCTATGGCCGATGTCGAGAAAGCGAAGGCAGAAGGAAAA
GTAGGGGTCTTCTTTGGTGCGCAAAACTGTTCTCCAATTGATGATGAAATTGGCCTGATTGAAGTCATGCGTCGCCAAGG
TTTGTTGATCATGCAGCTGACCTACAACAACCAAAGCTTGTTGGCGACAGGCTGCTATGAGCAGAACGACTCTGGTGTCA
CGCGCTTTGGTAAACAGGCCATCGAAGAGATGAACCGTGTTGGGATGATCATCGACATGTCACACAGTGCAGAGCGCTCG
ACATTGGAAGCGATTGATCTTTCTTCCCGCCCTATTTGCATCAGCCACGCAAACCCAACGTTTGCCCATGACGCTCTGCG
TAATAAATCTAACAACGTTATCAAAGCACTGACGGAACGCGGTGGTTTGATTGGCTTTAGTTTGTACCCGTTCCACCTGC
CAAATGGCAGCCAATGCACGCTTGATGATTTTTGCCAAATGGTCGCCAAAACGGCTGATTTGTTTGGTGTGGATCATCTG
GGTATTGGCAGTGATCTTTGCTTGAACCAGCCACAGCAAGTCCTTGAATGGATGCGTAATGGCCGTTGGTCGAAAGCGAT
GGATTATGGTGAAGGTTCGGCAAGTAATTCTGGTTGGCCCGATGCACTGCCTTGGTTTAGCGGTAGCAAGGGTATGGAGA
ATATTTACAACGGCTTAATGCGTCATGGGTTCAGCGAATCTGAGGCAGGAAAAATACTGGGTGAGAACTGGTTTAACTTT
TTGAAAGAAGGGCTGGAGGCCAAGTTATAA

Upstream 100 bases:

>100_bases
GTGGTGAAAACCGCTTATCAACGTCCTTACTAAGTGAAATAGGGCAGCCGAGGATTACGCTGCCCAACCTTAAAGGCTCA
TTAACGTTTAAGGAGTGGTT

Downstream 100 bases:

>100_bases
GTTGTAACCCGAACAAGGAATAGCCCGCCACCAATACAATAATAAGGCGGGCGTTAAAGTCACTTTTTGTAGCCGTTAAG
GCAGCTGCAATAAACCTCTG

Product: hypothetical protein

Products: NA

Alternate protein names: Dipeptidase; Peptidase; Renal Dipeptidase Family Protein; Glutamine Amidotransferase Class II/Dipeptidase; Glutamine Amidotransferase; Zn-Dependent Dipeptidase; M19 Family Peptidase; Microsomal Dipeptidase; Dipeptidase Protein; Twin-Arginine Translocation Pathway Signal; Thermostable Dipeptidase; Zn-Dependent Dipeptidase Microsomal Dipeptidase; Periplasmic Dipeptidase; Renal Dipeptidase; Renal Dipeptidase Superfamily; Multidrug Resistance Protein B; Membrane Dipeptidase Family; Renal Dipeptidase Superfamily Protein; Dipeptidase Family Protein; Amma-Glutamyl Hydrolase Family Peptidase; Microsomal Dipeptidase Like Protein; Dipeptidase Bdp; Membrane-Bound Dipeptidase; Microsomal Dipeptidase-Like Protein; M19 Family Membrane Dipeptidase; LOW QUALITY PROTEIN Dipeptidase

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MYQQRIVIDGLQYCNWDREYFQTLKASGITAVHATIVYHENARETLTRFAEWNLRFEQNADLIMPIYSMADVEKAKAEGK
VGVFFGAQNCSPIDDEIGLIEVMRRQGLLIMQLTYNNQSLLATGCYEQNDSGVTRFGKQAIEEMNRVGMIIDMSHSAERS
TLEAIDLSSRPICISHANPTFAHDALRNKSNNVIKALTERGGLIGFSLYPFHLPNGSQCTLDDFCQMVAKTADLFGVDHL
GIGSDLCLNQPQQVLEWMRNGRWSKAMDYGEGSASNSGWPDALPWFSGSKGMENIYNGLMRHGFSESEAGKILGENWFNF
LKEGLEAKL

Sequences:

>Translated_329_residues
MYQQRIVIDGLQYCNWDREYFQTLKASGITAVHATIVYHENARETLTRFAEWNLRFEQNADLIMPIYSMADVEKAKAEGK
VGVFFGAQNCSPIDDEIGLIEVMRRQGLLIMQLTYNNQSLLATGCYEQNDSGVTRFGKQAIEEMNRVGMIIDMSHSAERS
TLEAIDLSSRPICISHANPTFAHDALRNKSNNVIKALTERGGLIGFSLYPFHLPNGSQCTLDDFCQMVAKTADLFGVDHL
GIGSDLCLNQPQQVLEWMRNGRWSKAMDYGEGSASNSGWPDALPWFSGSKGMENIYNGLMRHGFSESEAGKILGENWFNF
LKEGLEAKL
>Mature_329_residues
MYQQRIVIDGLQYCNWDREYFQTLKASGITAVHATIVYHENARETLTRFAEWNLRFEQNADLIMPIYSMADVEKAKAEGK
VGVFFGAQNCSPIDDEIGLIEVMRRQGLLIMQLTYNNQSLLATGCYEQNDSGVTRFGKQAIEEMNRVGMIIDMSHSAERS
TLEAIDLSSRPICISHANPTFAHDALRNKSNNVIKALTERGGLIGFSLYPFHLPNGSQCTLDDFCQMVAKTADLFGVDHL
GIGSDLCLNQPQQVLEWMRNGRWSKAMDYGEGSASNSGWPDALPWFSGSKGMENIYNGLMRHGFSESEAGKILGENWFNF
LKEGLEAKL

Specific function: Unknown

COG id: COG2355

COG function: function code E; Zn-dependent dipeptidase, microsomal dipeptidase homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI189458885, Length=187, Percent_Identity=22.9946524064171, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI4758190, Length=187, Percent_Identity=22.9946524064171, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI11641269, Length=187, Percent_Identity=25.668449197861, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI193211608, Length=187, Percent_Identity=24.0641711229947, Blast_Score=66, Evalue=5e-11,
Organism=Drosophila melanogaster, GI281362638, Length=185, Percent_Identity=25.9459459459459, Blast_Score=92, Evalue=6e-19,
Organism=Drosophila melanogaster, GI281362636, Length=185, Percent_Identity=25.9459459459459, Blast_Score=92, Evalue=6e-19,
Organism=Drosophila melanogaster, GI161083233, Length=177, Percent_Identity=25.9887005649718, Blast_Score=85, Evalue=6e-17,
Organism=Drosophila melanogaster, GI221475880, Length=183, Percent_Identity=25.1366120218579, Blast_Score=79, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36906; Mature: 36906

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYQQRIVIDGLQYCNWDREYFQTLKASGITAVHATIVYHENARETLTRFAEWNLRFEQNA
CCCCEEEECHHHHCCCCHHHHHHHHHCCCEEEEEEEEEECCHHHHHHHHHHCCEEECCCC
DLIMPIYSMADVEKAKAEGKVGVFFGAQNCSPIDDEIGLIEVMRRQGLLIMQLTYNNQSL
CEEEHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCEEEEEEEECCCEE
LATGCYEQNDSGVTRFGKQAIEEMNRVGMIIDMSHSAERSTLEAIDLSSRPICISHANPT
EEECCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHCCCCCCCEEEECCCCC
FAHDALRNKSNNVIKALTERGGLIGFSLYPFHLPNGSQCTLDDFCQMVAKTADLFGVDHL
HHHHHHHCCCCHHHHHHHHCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCC
GIGSDLCLNQPQQVLEWMRNGRWSKAMDYGEGSASNSGWPDALPWFSGSKGMENIYNGLM
CCCCHHHCCCHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
RHGFSESEAGKILGENWFNFLKEGLEAKL
HCCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYQQRIVIDGLQYCNWDREYFQTLKASGITAVHATIVYHENARETLTRFAEWNLRFEQNA
CCCCEEEECHHHHCCCCHHHHHHHHHCCCEEEEEEEEEECCHHHHHHHHHHCCEEECCCC
DLIMPIYSMADVEKAKAEGKVGVFFGAQNCSPIDDEIGLIEVMRRQGLLIMQLTYNNQSL
CEEEHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCEEEEEEEECCCEE
LATGCYEQNDSGVTRFGKQAIEEMNRVGMIIDMSHSAERSTLEAIDLSSRPICISHANPT
EEECCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHCCCCCCCEEEECCCCC
FAHDALRNKSNNVIKALTERGGLIGFSLYPFHLPNGSQCTLDDFCQMVAKTADLFGVDHL
HHHHHHHCCCCHHHHHHHHCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCC
GIGSDLCLNQPQQVLEWMRNGRWSKAMDYGEGSASNSGWPDALPWFSGSKGMENIYNGLM
CCCCHHHCCCHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
RHGFSESEAGKILGENWFNFLKEGLEAKL
HCCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA