| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156976727
Identifier: 156976727
GI number: 156976727
Start: 712020
End: 713009
Strand: Direct
Name: 156976727
Synonym: VIBHAR_05502
Alternate gene names: NA
Gene position: 712020-713009 (Clockwise)
Preceding gene: 156976726
Following gene: 156976728
Centisome position: 32.31
GC content: 47.37
Gene sequence:
>990_bases ATGTACCAACAACGGATTGTGATTGATGGATTGCAGTACTGCAATTGGGATAGAGAGTACTTTCAGACACTAAAAGCCAG CGGCATCACCGCTGTTCATGCAACGATCGTTTATCACGAAAATGCACGAGAAACGTTAACCCGCTTTGCTGAATGGAATC TTCGCTTCGAGCAAAACGCAGACCTCATCATGCCAATTTATTCTATGGCCGATGTCGAGAAAGCGAAGGCAGAAGGAAAA GTAGGGGTCTTCTTTGGTGCGCAAAACTGTTCTCCAATTGATGATGAAATTGGCCTGATTGAAGTCATGCGTCGCCAAGG TTTGTTGATCATGCAGCTGACCTACAACAACCAAAGCTTGTTGGCGACAGGCTGCTATGAGCAGAACGACTCTGGTGTCA CGCGCTTTGGTAAACAGGCCATCGAAGAGATGAACCGTGTTGGGATGATCATCGACATGTCACACAGTGCAGAGCGCTCG ACATTGGAAGCGATTGATCTTTCTTCCCGCCCTATTTGCATCAGCCACGCAAACCCAACGTTTGCCCATGACGCTCTGCG TAATAAATCTAACAACGTTATCAAAGCACTGACGGAACGCGGTGGTTTGATTGGCTTTAGTTTGTACCCGTTCCACCTGC CAAATGGCAGCCAATGCACGCTTGATGATTTTTGCCAAATGGTCGCCAAAACGGCTGATTTGTTTGGTGTGGATCATCTG GGTATTGGCAGTGATCTTTGCTTGAACCAGCCACAGCAAGTCCTTGAATGGATGCGTAATGGCCGTTGGTCGAAAGCGAT GGATTATGGTGAAGGTTCGGCAAGTAATTCTGGTTGGCCCGATGCACTGCCTTGGTTTAGCGGTAGCAAGGGTATGGAGA ATATTTACAACGGCTTAATGCGTCATGGGTTCAGCGAATCTGAGGCAGGAAAAATACTGGGTGAGAACTGGTTTAACTTT TTGAAAGAAGGGCTGGAGGCCAAGTTATAA
Upstream 100 bases:
>100_bases GTGGTGAAAACCGCTTATCAACGTCCTTACTAAGTGAAATAGGGCAGCCGAGGATTACGCTGCCCAACCTTAAAGGCTCA TTAACGTTTAAGGAGTGGTT
Downstream 100 bases:
>100_bases GTTGTAACCCGAACAAGGAATAGCCCGCCACCAATACAATAATAAGGCGGGCGTTAAAGTCACTTTTTGTAGCCGTTAAG GCAGCTGCAATAAACCTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: Dipeptidase; Peptidase; Renal Dipeptidase Family Protein; Glutamine Amidotransferase Class II/Dipeptidase; Glutamine Amidotransferase; Zn-Dependent Dipeptidase; M19 Family Peptidase; Microsomal Dipeptidase; Dipeptidase Protein; Twin-Arginine Translocation Pathway Signal; Thermostable Dipeptidase; Zn-Dependent Dipeptidase Microsomal Dipeptidase; Periplasmic Dipeptidase; Renal Dipeptidase; Renal Dipeptidase Superfamily; Multidrug Resistance Protein B; Membrane Dipeptidase Family; Renal Dipeptidase Superfamily Protein; Dipeptidase Family Protein; Amma-Glutamyl Hydrolase Family Peptidase; Microsomal Dipeptidase Like Protein; Dipeptidase Bdp; Membrane-Bound Dipeptidase; Microsomal Dipeptidase-Like Protein; M19 Family Membrane Dipeptidase; LOW QUALITY PROTEIN Dipeptidase
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MYQQRIVIDGLQYCNWDREYFQTLKASGITAVHATIVYHENARETLTRFAEWNLRFEQNADLIMPIYSMADVEKAKAEGK VGVFFGAQNCSPIDDEIGLIEVMRRQGLLIMQLTYNNQSLLATGCYEQNDSGVTRFGKQAIEEMNRVGMIIDMSHSAERS TLEAIDLSSRPICISHANPTFAHDALRNKSNNVIKALTERGGLIGFSLYPFHLPNGSQCTLDDFCQMVAKTADLFGVDHL GIGSDLCLNQPQQVLEWMRNGRWSKAMDYGEGSASNSGWPDALPWFSGSKGMENIYNGLMRHGFSESEAGKILGENWFNF LKEGLEAKL
Sequences:
>Translated_329_residues MYQQRIVIDGLQYCNWDREYFQTLKASGITAVHATIVYHENARETLTRFAEWNLRFEQNADLIMPIYSMADVEKAKAEGK VGVFFGAQNCSPIDDEIGLIEVMRRQGLLIMQLTYNNQSLLATGCYEQNDSGVTRFGKQAIEEMNRVGMIIDMSHSAERS TLEAIDLSSRPICISHANPTFAHDALRNKSNNVIKALTERGGLIGFSLYPFHLPNGSQCTLDDFCQMVAKTADLFGVDHL GIGSDLCLNQPQQVLEWMRNGRWSKAMDYGEGSASNSGWPDALPWFSGSKGMENIYNGLMRHGFSESEAGKILGENWFNF LKEGLEAKL >Mature_329_residues MYQQRIVIDGLQYCNWDREYFQTLKASGITAVHATIVYHENARETLTRFAEWNLRFEQNADLIMPIYSMADVEKAKAEGK VGVFFGAQNCSPIDDEIGLIEVMRRQGLLIMQLTYNNQSLLATGCYEQNDSGVTRFGKQAIEEMNRVGMIIDMSHSAERS TLEAIDLSSRPICISHANPTFAHDALRNKSNNVIKALTERGGLIGFSLYPFHLPNGSQCTLDDFCQMVAKTADLFGVDHL GIGSDLCLNQPQQVLEWMRNGRWSKAMDYGEGSASNSGWPDALPWFSGSKGMENIYNGLMRHGFSESEAGKILGENWFNF LKEGLEAKL
Specific function: Unknown
COG id: COG2355
COG function: function code E; Zn-dependent dipeptidase, microsomal dipeptidase homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI189458885, Length=187, Percent_Identity=22.9946524064171, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI4758190, Length=187, Percent_Identity=22.9946524064171, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI11641269, Length=187, Percent_Identity=25.668449197861, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI193211608, Length=187, Percent_Identity=24.0641711229947, Blast_Score=66, Evalue=5e-11, Organism=Drosophila melanogaster, GI281362638, Length=185, Percent_Identity=25.9459459459459, Blast_Score=92, Evalue=6e-19, Organism=Drosophila melanogaster, GI281362636, Length=185, Percent_Identity=25.9459459459459, Blast_Score=92, Evalue=6e-19, Organism=Drosophila melanogaster, GI161083233, Length=177, Percent_Identity=25.9887005649718, Blast_Score=85, Evalue=6e-17, Organism=Drosophila melanogaster, GI221475880, Length=183, Percent_Identity=25.1366120218579, Blast_Score=79, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36906; Mature: 36906
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYQQRIVIDGLQYCNWDREYFQTLKASGITAVHATIVYHENARETLTRFAEWNLRFEQNA CCCCEEEECHHHHCCCCHHHHHHHHHCCCEEEEEEEEEECCHHHHHHHHHHCCEEECCCC DLIMPIYSMADVEKAKAEGKVGVFFGAQNCSPIDDEIGLIEVMRRQGLLIMQLTYNNQSL CEEEHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCEEEEEEEECCCEE LATGCYEQNDSGVTRFGKQAIEEMNRVGMIIDMSHSAERSTLEAIDLSSRPICISHANPT EEECCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHCCCCCCCEEEECCCCC FAHDALRNKSNNVIKALTERGGLIGFSLYPFHLPNGSQCTLDDFCQMVAKTADLFGVDHL HHHHHHHCCCCHHHHHHHHCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCC GIGSDLCLNQPQQVLEWMRNGRWSKAMDYGEGSASNSGWPDALPWFSGSKGMENIYNGLM CCCCHHHCCCHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH RHGFSESEAGKILGENWFNFLKEGLEAKL HCCCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MYQQRIVIDGLQYCNWDREYFQTLKASGITAVHATIVYHENARETLTRFAEWNLRFEQNA CCCCEEEECHHHHCCCCHHHHHHHHHCCCEEEEEEEEEECCHHHHHHHHHHCCEEECCCC DLIMPIYSMADVEKAKAEGKVGVFFGAQNCSPIDDEIGLIEVMRRQGLLIMQLTYNNQSL CEEEHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCEEEEEEEECCCEE LATGCYEQNDSGVTRFGKQAIEEMNRVGMIIDMSHSAERSTLEAIDLSSRPICISHANPT EEECCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHCCCCCCCEEEECCCCC FAHDALRNKSNNVIKALTERGGLIGFSLYPFHLPNGSQCTLDDFCQMVAKTADLFGVDHL HHHHHHHCCCCHHHHHHHHCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCC GIGSDLCLNQPQQVLEWMRNGRWSKAMDYGEGSASNSGWPDALPWFSGSKGMENIYNGLM CCCCHHHCCCHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH RHGFSESEAGKILGENWFNFLKEGLEAKL HCCCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA