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The map label for this gene is 156976651

Identifier: 156976651

GI number: 156976651

Start: 647237

End: 647581

Strand: Direct

Name: 156976651

Synonym: VIBHAR_05425

Alternate gene names: NA

Gene position: 647237-647581 (Clockwise)

Preceding gene: 156976650

Following gene: 156976653

Centisome position: 29.37

GC content: 45.51

Gene sequence:

>345_bases
ATGGAACTAAAACAATTTTTGGATGCGCTAGCGGCATCACCAGAGACAGTAGAATTTGAAACGACAATGGCAGCGATCGA
GGCGAACTACGAGTTTACGCCAGCGGCCTTTGTTAATGGTGAAACGCAGAATAATGCAGGTGAGAACAACGGTTCATGCA
AGATCTTTGCTTTTGGTCAACTGAATAATCTAAGCAAAGAGGCAACGTTGGCGTGTTTTGGTCGTTTCTACCGAGAAGAT
GTGTTGGCGCACCCAGAGAACAACGACCATCAAAACATTCGTAACTTTATGGTGACGGGCTGGGATGGCGTAAAGTTTGA
ATACCAAGCGTTAGCGCAGAAATAG

Upstream 100 bases:

>100_bases
TGTATGATTTATGACCCTTGTATTGGCTTTTTATGAAACAAATGTGTCACTGTTTATCCAATGTTATTTGGGAAAGTAAA
GGCACTAGGAAGTAGGAATA

Downstream 100 bases:

>100_bases
CGCCCTAATAGTCTCGATTTCAATGACAAGCCAGTCAGCAAAAGACGACTAACTAGGCGACTGGCTTTTTCTCCAAACAC
TTACGGCATAAACAAAGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: Type III Effector HopPmaJ; Cytoplasmic Protein; HopJ Type III Effector Family Protein; HopJ1 Protein; Type III Effector; Hopj Type III Effector Protein

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MELKQFLDALAASPETVEFETTMAAIEANYEFTPAAFVNGETQNNAGENNGSCKIFAFGQLNNLSKEATLACFGRFYRED
VLAHPENNDHQNIRNFMVTGWDGVKFEYQALAQK

Sequences:

>Translated_114_residues
MELKQFLDALAASPETVEFETTMAAIEANYEFTPAAFVNGETQNNAGENNGSCKIFAFGQLNNLSKEATLACFGRFYRED
VLAHPENNDHQNIRNFMVTGWDGVKFEYQALAQK
>Mature_114_residues
MELKQFLDALAASPETVEFETTMAAIEANYEFTPAAFVNGETQNNAGENNGSCKIFAFGQLNNLSKEATLACFGRFYRED
VLAHPENNDHQNIRNFMVTGWDGVKFEYQALAQK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12763; Mature: 12763

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELKQFLDALAASPETVEFETTMAAIEANYEFTPAAFVNGETQNNAGENNGSCKIFAFGQ
CCHHHHHHHHHCCCCCEEHHHHEEEEECCCCCCCEEEECCCCCCCCCCCCCCEEEEEECC
LNNLSKEATLACFGRFYREDVLAHPENNDHQNIRNFMVTGWDGVKFEYQALAQK
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHEEEECCCCCCCHHHHHCCC
>Mature Secondary Structure
MELKQFLDALAASPETVEFETTMAAIEANYEFTPAAFVNGETQNNAGENNGSCKIFAFGQ
CCHHHHHHHHHCCCCCEEHHHHEEEEECCCCCCCEEEECCCCCCCCCCCCCCEEEEEECC
LNNLSKEATLACFGRFYREDVLAHPENNDHQNIRNFMVTGWDGVKFEYQALAQK
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHEEEECCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA