Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156976650

Identifier: 156976650

GI number: 156976650

Start: 647038

End: 647172

Strand: Direct

Name: 156976650

Synonym: VIBHAR_05424

Alternate gene names: NA

Gene position: 647038-647172 (Clockwise)

Preceding gene: 156976648

Following gene: 156976651

Centisome position: 29.36

GC content: 32.59

Gene sequence:

>135_bases
ATGTCACTCAATGCACCTAAAGTAGATATCTATTCATTCACCAACACAGTGAAGAATAGCGCATTGATTGAAGTGTTATT
AAATAAGGCTCTGAATATATGTATGATTTATGACCCTTGTATTGGCTTTTTATGA

Upstream 100 bases:

>100_bases
GTCAGGTTGAGATGAACATGCGATTGCAAGTGAAGATAATGCCAATACGCCTATTGCCTTAAATGGGGTGGTCATGATAT
TTCCTTATTAAACGGATACA

Downstream 100 bases:

>100_bases
AACAAATGTGTCACTGTTTATCCAATGTTATTTGGGAAAGTAAAGGCACTAGGAAGTAGGAATAATGGAACTAAAACAAT
TTTTGGATGCGCTAGCGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 44; Mature: 43

Protein sequence:

>44_residues
MSLNAPKVDIYSFTNTVKNSALIEVLLNKALNICMIYDPCIGFL

Sequences:

>Translated_44_residues
MSLNAPKVDIYSFTNTVKNSALIEVLLNKALNICMIYDPCIGFL
>Mature_43_residues
SLNAPKVDIYSFTNTVKNSALIEVLLNKALNICMIYDPCIGFL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4892; Mature: 4761

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
9.1 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLNAPKVDIYSFTNTVKNSALIEVLLNKALNICMIYDPCIGFL
CCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCC
>Mature Secondary Structure 
SLNAPKVDIYSFTNTVKNSALIEVLLNKALNICMIYDPCIGFL
CCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA