| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is phhA [H]
Identifier: 156976647
GI number: 156976647
Start: 643875
End: 644669
Strand: Direct
Name: phhA [H]
Synonym: VIBHAR_05421
Alternate gene names: 156976647
Gene position: 643875-644669 (Clockwise)
Preceding gene: 156976645
Following gene: 156976648
Centisome position: 29.21
GC content: 47.55
Gene sequence:
>795_bases ATGACTCAGTATCATTCAAAACCCGTCGATCAGGATGGAAGGGTAGAATGGAGCCATGAAGAGGATGCCATTTGGCGCGA CTTGGTAACCAGACAAATGAGCGTGATTCAAGACCGTGCATGCGAGGCGTATCTGCATGGACTTAAGCTGCTTGATTTAC CCCAGGACCGAGTGCCACAACTGCCCGAAATCAATCGTGTTTTGATGGAAACCACGGGCTGGCAAGTGGAGCCAGTGCCA GCATTGATCGACTTTGATCGTTTCTTCAATCTGCTTGGCAACAAACGCTTCCCAGTCGCGACGTTTTTGAGAACGCGAGA AGAGTTTGATTACCTACAAGAGCCGGATTTCTTCCATGAGATTTTTGGTCATTGCGCCATGCTCACCAACCCTGATTTTG CAGCCTTTACCGAGCACTACGGACAGCTTGGACAAGCTGCGACACCAAAGCAGCGAGGGTACCTTGCGCGTCTATATTGG TTTACAGTCGAGTTTGGCTTGGTCCGAGAAGGTAATAAAACCAAAATCTATGGTGGCGGCATCCTTTCATCTCCGGGAGA AACCATCTATTCATTGGAAAGCGACATCGCGATTAGAGGCGAATTCGATCTGCAAACTGTGCTAAGAACCCCTTATCGCA TCGATATTATGCAGCCGAAATACTACGTGATTGAAGAATTGTCCCAGCTTTTCCAAATCAGCCAACTGAATTTATTGAAA CAAGCCGATCTAGCGATTGAAGCCGGATTGCTTCCACCACTTTTTGAACCAAAGGAACCTGCTCATGTTGAATGA
Upstream 100 bases:
>100_bases ATGTTACACCTACATTTTGATTGAAAAATCGTCGGGGGATTGGAAGGTGAAAAGAGTGCAGATAGGCTTAATGTAAAGGA TTTGTTAACGGAGATGTGCA
Downstream 100 bases:
>100_bases ACAAAAATGCGAAGCTTGTAGTATCGATGCCATTGCACTTAGTAAAGAGGAACAACAGTCTCTGCTGCTGCAATTGTCTG ATTGGCAGATCATTGAGAGA
Product: phenylalanine 4-monooxygenase
Products: NA
Alternate protein names: PAH; Phe-4-monooxygenase [H]
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MTQYHSKPVDQDGRVEWSHEEDAIWRDLVTRQMSVIQDRACEAYLHGLKLLDLPQDRVPQLPEINRVLMETTGWQVEPVP ALIDFDRFFNLLGNKRFPVATFLRTREEFDYLQEPDFFHEIFGHCAMLTNPDFAAFTEHYGQLGQAATPKQRGYLARLYW FTVEFGLVREGNKTKIYGGGILSSPGETIYSLESDIAIRGEFDLQTVLRTPYRIDIMQPKYYVIEELSQLFQISQLNLLK QADLAIEAGLLPPLFEPKEPAHVE
Sequences:
>Translated_264_residues MTQYHSKPVDQDGRVEWSHEEDAIWRDLVTRQMSVIQDRACEAYLHGLKLLDLPQDRVPQLPEINRVLMETTGWQVEPVP ALIDFDRFFNLLGNKRFPVATFLRTREEFDYLQEPDFFHEIFGHCAMLTNPDFAAFTEHYGQLGQAATPKQRGYLARLYW FTVEFGLVREGNKTKIYGGGILSSPGETIYSLESDIAIRGEFDLQTVLRTPYRIDIMQPKYYVIEELSQLFQISQLNLLK QADLAIEAGLLPPLFEPKEPAHVE >Mature_263_residues TQYHSKPVDQDGRVEWSHEEDAIWRDLVTRQMSVIQDRACEAYLHGLKLLDLPQDRVPQLPEINRVLMETTGWQVEPVPA LIDFDRFFNLLGNKRFPVATFLRTREEFDYLQEPDFFHEIFGHCAMLTNPDFAAFTEHYGQLGQAATPKQRGYLARLYWF TVEFGLVREGNKTKIYGGGILSSPGETIYSLESDIAIRGEFDLQTVLRTPYRIDIMQPKYYVIEELSQLFQISQLNLLKQ ADLAIEAGLLPPLFEPKEPAHVE
Specific function: Unknown
COG id: COG3186
COG function: function code E; Phenylalanine-4-hydroxylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the biopterin-dependent aromatic amino acid hydroxylase family [H]
Homologues:
Organism=Homo sapiens, GI88900503, Length=228, Percent_Identity=34.2105263157895, Blast_Score=135, Evalue=4e-32, Organism=Homo sapiens, GI88900501, Length=228, Percent_Identity=34.2105263157895, Blast_Score=135, Evalue=4e-32, Organism=Homo sapiens, GI88900505, Length=228, Percent_Identity=34.2105263157895, Blast_Score=135, Evalue=5e-32, Organism=Homo sapiens, GI4557819, Length=228, Percent_Identity=32.0175438596491, Blast_Score=123, Evalue=2e-28, Organism=Homo sapiens, GI31795563, Length=221, Percent_Identity=33.4841628959276, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI4759248, Length=231, Percent_Identity=29.4372294372294, Blast_Score=112, Evalue=3e-25, Organism=Caenorhabditis elegans, GI71980736, Length=222, Percent_Identity=31.0810810810811, Blast_Score=128, Evalue=3e-30, Organism=Caenorhabditis elegans, GI17531391, Length=229, Percent_Identity=31.4410480349345, Blast_Score=119, Evalue=2e-27, Organism=Caenorhabditis elegans, GI115532103, Length=254, Percent_Identity=28.740157480315, Blast_Score=107, Evalue=8e-24, Organism=Caenorhabditis elegans, GI115533973, Length=235, Percent_Identity=29.3617021276596, Blast_Score=106, Evalue=1e-23, Organism=Caenorhabditis elegans, GI71980731, Length=155, Percent_Identity=28.3870967741935, Blast_Score=87, Evalue=8e-18, Organism=Drosophila melanogaster, GI17136776, Length=215, Percent_Identity=31.6279069767442, Blast_Score=114, Evalue=4e-26, Organism=Drosophila melanogaster, GI17136774, Length=217, Percent_Identity=31.3364055299539, Blast_Score=114, Evalue=6e-26, Organism=Drosophila melanogaster, GI62472054, Length=227, Percent_Identity=29.9559471365639, Blast_Score=111, Evalue=4e-25, Organism=Drosophila melanogaster, GI24660393, Length=227, Percent_Identity=29.9559471365639, Blast_Score=111, Evalue=4e-25, Organism=Drosophila melanogaster, GI24654994, Length=230, Percent_Identity=29.1304347826087, Blast_Score=100, Evalue=8e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001273 - InterPro: IPR018301 - InterPro: IPR019774 - InterPro: IPR005960 [H]
Pfam domain/function: PF00351 Biopterin_H [H]
EC number: =1.14.16.1 [H]
Molecular weight: Translated: 30555; Mature: 30424
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: PS00367 BIOPTERIN_HYDROXYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQYHSKPVDQDGRVEWSHEEDAIWRDLVTRQMSVIQDRACEAYLHGLKLLDLPQDRVPQ CCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHCCC LPEINRVLMETTGWQVEPVPALIDFDRFFNLLGNKRFPVATFLRTREEFDYLQEPDFFHE CCHHHHHHHHCCCCEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHH IFGHCAMLTNPDFAAFTEHYGQLGQAATPKQRGYLARLYWFTVEFGLVREGNKTKIYGGG HHHHEEECCCCCHHHHHHHHHHHCCCCCCHHCCCEEEEEEEEEEEHEEECCCCEEEEECC ILSSPGETIYSLESDIAIRGEFDLQTVLRTPYRIDIMQPKYYVIEELSQLFQISQLNLLK EECCCCCEEEECCCCEEEECCCHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHH QADLAIEAGLLPPLFEPKEPAHVE HHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure TQYHSKPVDQDGRVEWSHEEDAIWRDLVTRQMSVIQDRACEAYLHGLKLLDLPQDRVPQ CCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHCCC LPEINRVLMETTGWQVEPVPALIDFDRFFNLLGNKRFPVATFLRTREEFDYLQEPDFFHE CCHHHHHHHHCCCCEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHH IFGHCAMLTNPDFAAFTEHYGQLGQAATPKQRGYLARLYWFTVEFGLVREGNKTKIYGGG HHHHEEECCCCCHHHHHHHHHHHCCCCCCHHCCCEEEEEEEEEEEHEEECCCCEEEEECC ILSSPGETIYSLESDIAIRGEFDLQTVLRTPYRIDIMQPKYYVIEELSQLFQISQLNLLK EECCCCCEEEECCCCEEEECCCHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHH QADLAIEAGLLPPLFEPKEPAHVE HHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]