Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is phhB

Identifier: 156976648

GI number: 156976648

Start: 644659

End: 644997

Strand: Direct

Name: phhB

Synonym: VIBHAR_05422

Alternate gene names: NA

Gene position: 644659-644997 (Clockwise)

Preceding gene: 156976647

Following gene: 156976650

Centisome position: 29.25

GC content: 42.77

Gene sequence:

>339_bases
ATGTTGAATGAACAAAAATGCGAAGCTTGTAGTATCGATGCCATTGCACTTAGTAAAGAGGAACAACAGTCTCTGCTGCT
GCAATTGTCTGATTGGCAGATCATTGAGAGAGATGAGATTCCTCAACTTGAAAAGGTCTACAAGTTTAAGAACTTCAAAC
AAGCGTGGGCGTTTAGCAACAAGATTGCTGAGCTTGCAGAAGATGAATTTCATCACCCATCTATCTTGCTGGAGTGGGGC
AAAGTGACCATCACTTGGTGGAGCCACTCTATTAAAGGTCTGCATAAGAACGACTTTATCTGTGCTTCGAAGTGCGACGC
ATTGGCGATTGAAGAGTAA

Upstream 100 bases:

>100_bases
CAGCTTTTCCAAATCAGCCAACTGAATTTATTGAAACAAGCCGATCTAGCGATTGAAGCCGGATTGCTTCCACCACTTTT
TGAACCAAAGGAACCTGCTC

Downstream 100 bases:

>100_bases
AGCTGAATGATTAAAGAGAGATTCCGGACATCTCGTTCCTCGATTCCGGAATGACGTTGGTGGTGATGGGGTTACTCAGA
ACTGCAAAATGATGCACTCT

Product: pterin-4-alpha-carbinolamine dehydratase

Products: NA

Alternate protein names: PHS; 4-alpha-hydroxy-tetrahydropterin dehydratase; Pterin carbinolamine dehydratase; PCD

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MLNEQKCEACSIDAIALSKEEQQSLLLQLSDWQIIERDEIPQLEKVYKFKNFKQAWAFSNKIAELAEDEFHHPSILLEWG
KVTITWWSHSIKGLHKNDFICASKCDALAIEE

Sequences:

>Translated_112_residues
MLNEQKCEACSIDAIALSKEEQQSLLLQLSDWQIIERDEIPQLEKVYKFKNFKQAWAFSNKIAELAEDEFHHPSILLEWG
KVTITWWSHSIKGLHKNDFICASKCDALAIEE
>Mature_112_residues
MLNEQKCEACSIDAIALSKEEQQSLLLQLSDWQIIERDEIPQLEKVYKFKNFKQAWAFSNKIAELAEDEFHHPSILLEWG
KVTITWWSHSIKGLHKNDFICASKCDALAIEE

Specific function: Unknown

COG id: COG2154

COG function: function code H; Pterin-4a-carbinolamine dehydratase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pterin-4-alpha-carbinolamine dehydratase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PHS_VIBHB (A7N3S9)

Other databases:

- EMBL:   CP000790
- RefSeq:   YP_001447554.1
- ProteinModelPortal:   A7N3S9
- SMR:   A7N3S9
- STRING:   A7N3S9
- GeneID:   5556512
- GenomeReviews:   CP000790_GR
- KEGG:   vha:VIBHAR_05422
- eggNOG:   COG2154
- HOGENOM:   HBG705804
- OMA:   ILTEWGK
- ProtClustDB:   PRK00823
- HAMAP:   MF_00434
- InterPro:   IPR001533
- Gene3D:   G3DSA:3.30.1360.20
- PANTHER:   PTHR12599

Pfam domain/function: PF01329 Pterin_4a; SSF55248 Trans_pterinDh

EC number: =4.2.1.96

Molecular weight: Translated: 13035; Mature: 13035

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNEQKCEACSIDAIALSKEEQQSLLLQLSDWQIIERDEIPQLEKVYKFKNFKQAWAFSN
CCCCCCCCCCCCCCEECCCHHHHHHEEECCCCEEECCCCCCHHHHHHHHHCHHHHHHHHH
KIAELAEDEFHHPSILLEWGKVTITWWSHSIKGLHKNDFICASKCDALAIEE
HHHHHHHHCCCCCEEEEECCCEEEEEECCCCCCCCCCCEEECCCCCEEEECC
>Mature Secondary Structure
MLNEQKCEACSIDAIALSKEEQQSLLLQLSDWQIIERDEIPQLEKVYKFKNFKQAWAFSN
CCCCCCCCCCCCCCEECCCHHHHHHEEECCCCEEECCCCCCHHHHHHHHHCHHHHHHHHH
KIAELAEDEFHHPSILLEWGKVTITWWSHSIKGLHKNDFICASKCDALAIEE
HHHHHHHHCCCCCEEEEECCCEEEEEECCCCCCCCCCCEEECCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA