Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

Click here to switch to the map view.

The map label for this gene is 156976640

Identifier: 156976640

GI number: 156976640

Start: 637045

End: 637161

Strand: Direct

Name: 156976640

Synonym: VIBHAR_05414

Alternate gene names: NA

Gene position: 637045-637161 (Clockwise)

Preceding gene: 156976636

Following gene: 156976642

Centisome position: 28.9

GC content: 37.61

Gene sequence:

>117_bases
ATGTTTCATATCGACTCCAACCGCTTAATAGAGTGGTTTTTATACCGATTTTGGAAAAAGAGTACGTTGAAGCGGATCAT
TTTTGAGTTAAGCTGCAGTTTCCTTTGGCATTCATGA

Upstream 100 bases:

>100_bases
GGCCATGCGTTTCCGAATGTGTTTTAACGTTTTCACTCTCGTCGTCTTCATCATAGTAGCGCACAACAAACGGTGTCAGC
ATGACACTCGAAGGTAGAAA

Downstream 100 bases:

>100_bases
GCACTAGGTCACATAGATAATATGCAATCCTATCAATTTCGTTTCACCCTCTACGGTTGTATCGCCATTCTTTCTTGGAG
CTGTTTACTCGGCATCGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 38; Mature: 38

Protein sequence:

>38_residues
MFHIDSNRLIEWFLYRFWKKSTLKRIIFELSCSFLWHS

Sequences:

>Translated_38_residues
MFHIDSNRLIEWFLYRFWKKSTLKRIIFELSCSFLWHS
>Mature_38_residues
MFHIDSNRLIEWFLYRFWKKSTLKRIIFELSCSFLWHS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4880; Mature: 4880

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFHIDSNRLIEWFLYRFWKKSTLKRIIFELSCSFLWHS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFHIDSNRLIEWFLYRFWKKSTLKRIIFELSCSFLWHS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA