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The map label for this gene is yhbQ [C]

Identifier: 156976576

GI number: 156976576

Start: 578942

End: 579256

Strand: Direct

Name: yhbQ [C]

Synonym: VIBHAR_05350

Alternate gene names: 156976576

Gene position: 578942-579256 (Clockwise)

Preceding gene: 156976575

Following gene: 156976577

Centisome position: 26.27

GC content: 42.22

Gene sequence:

>315_bases
ATGAGTGATACTGCCGAGCAACGTTGGAGTGTTTATCTGATTCGTAACAACCGCAATGCTTTGTATTGCGGGGTAACAAA
TGACGTGGAAAGGCGTTTTAATCAGCACCAAAGTGGTAAAGGCGCGAAAGCACTAAAAGGAAAAGGGCCGCTTGTACTTG
AGTGGTCCTGTGCTTTTGAAAACAAAAGCATGGCTATGAAAGCGGAATACTTCATCAAACAGTTAACTAAAACTAAAAAA
GAGTTACTGGTGCAAGAAAGTGCGGTGATTCAAGTTGGTGAAGGCCAATCATTCGTCTTTTACTCGCGTAAATGA

Upstream 100 bases:

>100_bases
CTTCTGCGGGCTCTGAACGTATTACACAGCTTGAGCAAGAAGTCGCAGAGTTACGTGAAGAGCTTGCCGCTTTGAAAGAG
CAGGTTGAATCTTTGTTTTC

Downstream 100 bases:

>100_bases
GTTGCGGCACGCCAATTCGTTTATTGGGAAGGCTTAGGTGTAGTAGTCATAAGTGCAATGTATTGCCAGTCAATATAAAG
GTCTCGGCAGTCAAAACGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MSDTAEQRWSVYLIRNNRNALYCGVTNDVERRFNQHQSGKGAKALKGKGPLVLEWSCAFENKSMAMKAEYFIKQLTKTKK
ELLVQESAVIQVGEGQSFVFYSRK

Sequences:

>Translated_104_residues
MSDTAEQRWSVYLIRNNRNALYCGVTNDVERRFNQHQSGKGAKALKGKGPLVLEWSCAFENKSMAMKAEYFIKQLTKTKK
ELLVQESAVIQVGEGQSFVFYSRK
>Mature_103_residues
SDTAEQRWSVYLIRNNRNALYCGVTNDVERRFNQHQSGKGAKALKGKGPLVLEWSCAFENKSMAMKAEYFIKQLTKTKKE
LLVQESAVIQVGEGQSFVFYSRK

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0213 family

Homologues:

Organism=Escherichia coli, GI1789545, Length=80, Percent_Identity=60, Blast_Score=103, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y5350_VIBHB (A7N3Z0)

Other databases:

- EMBL:   CP000790
- RefSeq:   YP_001447482.1
- ProteinModelPortal:   A7N3Z0
- SMR:   A7N3Z0
- STRING:   A7N3Z0
- GeneID:   5556535
- GenomeReviews:   CP000790_GR
- KEGG:   vha:VIBHAR_05350
- eggNOG:   COG2827
- HOGENOM:   HBG678874
- OMA:   GSLYCGI
- ProtClustDB:   CLSK913363
- GO:   GO:0005622
- InterPro:   IPR000305
- SMART:   SM00465

Pfam domain/function: PF01541 GIY-YIG; SSF82771 UvrC_N

EC number: NA

Molecular weight: Translated: 11912; Mature: 11781

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTAEQRWSVYLIRNNRNALYCGVTNDVERRFNQHQSGKGAKALKGKGPLVLEWSCAFE
CCCCCCCCEEEEEEECCCCEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCC
NKSMAMKAEYFIKQLTKTKKELLVQESAVIQVGEGQSFVFYSRK
CCCEEHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECC
>Mature Secondary Structure 
SDTAEQRWSVYLIRNNRNALYCGVTNDVERRFNQHQSGKGAKALKGKGPLVLEWSCAFE
CCCCCCCEEEEEEECCCCEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCC
NKSMAMKAEYFIKQLTKTKKELLVQESAVIQVGEGQSFVFYSRK
CCCEEHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA