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The map label for this gene is yceH [C]

Identifier: 156976575

GI number: 156976575

Start: 578292

End: 578945

Strand: Direct

Name: yceH [C]

Synonym: VIBHAR_05349

Alternate gene names: 156976575

Gene position: 578292-578945 (Clockwise)

Preceding gene: 156976574

Following gene: 156976576

Centisome position: 26.24

GC content: 48.01

Gene sequence:

>654_bases
ATGAAAGTTGAGCTAACGGCAATTGAAGCACGAGTAATTGGCTGCTTAATCGAAAAAGAAGTGACCACCCCCGACCAATA
TCCTCTCAGCCTTAACGCATTGACTAACGCATGCAACCAAAAGAGCAATCGTGAGCCAGTAATGTCGCTATCCGAAGCTG
ACGTACTATACGCGGTTGATGCGTTGATCGAACGCCGTTTAGTGAGCGACGAAAGTGGCTTCAACAGTCGCGTGAGCAAG
TACCAACATCGATTCTGCAATACCGAGTTTGGCGATCTAAAACTAACGAAACAAGAGAAAGGCATCGTATGCTGCATGCT
GCTTCGTGGTGCACAAACGCCAGGTGAGATTCGCACTCGCACAAACCGTCTTGCGACCTTCAACGATGTTAAAGAAGTTG
AAAATGTACTTGAGCACCTTGCTAATGATGAAAAGGGCCCATTAGTCGTGAAGCTACCTCGCGAAGCCGGTAAGCGTGAA
TCTCGATACATGCATTTGTTCTGCGGTGAAGTGGATGTCAGTGAGCTTGCGGTAGCAACGACGGCCCCTTCTTCTGCGGG
CTCTGAACGTATTACACAGCTTGAGCAAGAAGTCGCAGAGTTACGTGAAGAGCTTGCCGCTTTGAAAGAGCAGGTTGAAT
CTTTGTTTTCATGA

Upstream 100 bases:

>100_bases
GCATTAAGACCTAACCCGATTCGCAAAGGGTGTCAGGTCCATGCGCTATGCTTTAGCCTGATACCCAAATTCAAATGCAA
CAATAATAAGGAAATGCATT

Downstream 100 bases:

>100_bases
GTGATACTGCCGAGCAACGTTGGAGTGTTTATCTGATTCGTAACAACCGCAATGCTTTGTATTGCGGGGTAACAAATGAC
GTGGAAAGGCGTTTTAATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MKVELTAIEARVIGCLIEKEVTTPDQYPLSLNALTNACNQKSNREPVMSLSEADVLYAVDALIERRLVSDESGFNSRVSK
YQHRFCNTEFGDLKLTKQEKGIVCCMLLRGAQTPGEIRTRTNRLATFNDVKEVENVLEHLANDEKGPLVVKLPREAGKRE
SRYMHLFCGEVDVSELAVATTAPSSAGSERITQLEQEVAELREELAALKEQVESLFS

Sequences:

>Translated_217_residues
MKVELTAIEARVIGCLIEKEVTTPDQYPLSLNALTNACNQKSNREPVMSLSEADVLYAVDALIERRLVSDESGFNSRVSK
YQHRFCNTEFGDLKLTKQEKGIVCCMLLRGAQTPGEIRTRTNRLATFNDVKEVENVLEHLANDEKGPLVVKLPREAGKRE
SRYMHLFCGEVDVSELAVATTAPSSAGSERITQLEQEVAELREELAALKEQVESLFS
>Mature_217_residues
MKVELTAIEARVIGCLIEKEVTTPDQYPLSLNALTNACNQKSNREPVMSLSEADVLYAVDALIERRLVSDESGFNSRVSK
YQHRFCNTEFGDLKLTKQEKGIVCCMLLRGAQTPGEIRTRTNRLATFNDVKEVENVLEHLANDEKGPLVVKLPREAGKRE
SRYMHLFCGEVDVSELAVATTAPSSAGSERITQLEQEVAELREELAALKEQVESLFS

Specific function: Unknown

COG id: COG3132

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0502 family

Homologues:

Organism=Escherichia coli, GI1787306, Length=212, Percent_Identity=56.1320754716981, Blast_Score=243, Evalue=6e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y5349_VIBHB (A7N3Y9)

Other databases:

- EMBL:   CP000790
- RefSeq:   YP_001447481.1
- ProteinModelPortal:   A7N3Y9
- SMR:   A7N3Y9
- STRING:   A7N3Y9
- GeneID:   5556534
- GenomeReviews:   CP000790_GR
- KEGG:   vha:VIBHAR_05349
- NMPDR:   fig|338187.4.peg.3135
- eggNOG:   COG3132
- HOGENOM:   HBG298268
- OMA:   TTPDQYP
- ProtClustDB:   CLSK869747
- HAMAP:   MF_01584
- InterPro:   IPR007432
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10

Pfam domain/function: PF04337 DUF480

EC number: NA

Molecular weight: Translated: 24218; Mature: 24218

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVELTAIEARVIGCLIEKEVTTPDQYPLSLNALTNACNQKSNREPVMSLSEADVLYAVD
CEEEEHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
ALIERRLVSDESGFNSRVSKYQHRFCNTEFGDLKLTKQEKGIVCCMLLRGAQTPGEIRTR
HHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEHHCCCCCHHHHHH
TNRLATFNDVKEVENVLEHLANDEKGPLVVKLPREAGKRESRYMHLFCGEVDVSELAVAT
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHCCCHHHCEEEEEECCCCHHHHHEEE
TAPSSAGSERITQLEQEVAELREELAALKEQVESLFS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKVELTAIEARVIGCLIEKEVTTPDQYPLSLNALTNACNQKSNREPVMSLSEADVLYAVD
CEEEEHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
ALIERRLVSDESGFNSRVSKYQHRFCNTEFGDLKLTKQEKGIVCCMLLRGAQTPGEIRTR
HHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEHHCCCCCHHHHHH
TNRLATFNDVKEVENVLEHLANDEKGPLVVKLPREAGKRESRYMHLFCGEVDVSELAVAT
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHCCCHHHCEEEEEECCCCHHHHHEEE
TAPSSAGSERITQLEQEVAELREELAALKEQVESLFS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA