| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is yeeX [C]
Identifier: 156976572
GI number: 156976572
Start: 577442
End: 577756
Strand: Reverse
Name: yeeX [C]
Synonym: VIBHAR_05346
Alternate gene names: 156976572
Gene position: 577756-577442 (Counterclockwise)
Preceding gene: 156976579
Following gene: 156976571
Centisome position: 26.21
GC content: 42.22
Gene sequence:
>315_bases ATGAGTAGCGTATTTGAAATCGTGAACCAAGCTCGTCGTAAAAACAAACTAAAACGTGAGCTGCTTGATAACGAGAAAAA AGTTCGTGACAACCGTAAACGTGTAGACCTACTAGAAAACCTACTAGACTACATCAAGCCAGAAATGACTCACGACGAGA TCGTTGCAATCATCAAAAACATGAAAGCTGACTACGAAGACCGCGTTGACGATCACATCATCAAGAGTGCAGAAATCTCT AAAGCACGCCGTGACATCAGCCGTCGTATCCGTGAGCTAACAGAAGAAGACAAGCAAACTAGCGGTAAAAAATAA
Upstream 100 bases:
>100_bases TAAATGTTCAACCCTGCCGCACGTTTGATCTAAAGACTGTTATGCCACGAGATGTTGTGCTTTAATCGAGTCAGATATTC ACAAATTAGGAAAGGGAACC
Downstream 100 bases:
>100_bases GCCGACTTAGTTGCCATATTCAACCCCGAGCAAGCACGCCTTGCTCGGGGTTTCTTTTTGTCTCTTTGTTGTACAGTGTG TACAATAAACACAATTTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MSSVFEIVNQARRKNKLKRELLDNEKKVRDNRKRVDLLENLLDYIKPEMTHDEIVAIIKNMKADYEDRVDDHIIKSAEIS KARRDISRRIRELTEEDKQTSGKK
Sequences:
>Translated_104_residues MSSVFEIVNQARRKNKLKRELLDNEKKVRDNRKRVDLLENLLDYIKPEMTHDEIVAIIKNMKADYEDRVDDHIIKSAEIS KARRDISRRIRELTEEDKQTSGKK >Mature_103_residues SSVFEIVNQARRKNKLKRELLDNEKKVRDNRKRVDLLENLLDYIKPEMTHDEIVAIIKNMKADYEDRVDDHIIKSAEISK ARRDISRRIRELTEEDKQTSGKK
Specific function: Unknown
COG id: COG2926
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0265 family [H]
Homologues:
Organism=Escherichia coli, GI145693155, Length=92, Percent_Identity=61.9565217391304, Blast_Score=112, Evalue=5e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007458 - ProDom: PD030876 [H]
Pfam domain/function: PF04363 DUF496 [H]
EC number: NA
Molecular weight: Translated: 12422; Mature: 12291
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSVFEIVNQARRKNKLKRELLDNEKKVRDNRKRVDLLENLLDYIKPEMTHDEIVAIIKN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH MKADYEDRVDDHIIKSAEISKARRDISRRIRELTEEDKQTSGKK HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SSVFEIVNQARRKNKLKRELLDNEKKVRDNRKRVDLLENLLDYIKPEMTHDEIVAIIKN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH MKADYEDRVDDHIIKSAEISKARRDISRRIRELTEEDKQTSGKK HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA