| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156976506
Identifier: 156976506
GI number: 156976506
Start: 521817
End: 522665
Strand: Direct
Name: 156976506
Synonym: VIBHAR_05279
Alternate gene names: NA
Gene position: 521817-522665 (Clockwise)
Preceding gene: 156976505
Following gene: 156976507
Centisome position: 23.68
GC content: 47.59
Gene sequence:
>849_bases ATGAAAGTTAAATTACTGAGTGCAGTTATCGCAGCATCTTTTCTGGCAGGTTGTTCATCATCAGGTTCTTCGGACTCCCC TAGTGAGCCAGCAGGTGTGGCATCGGTGCAAACCTTCGAAGGTGAACATTTCGATGGAATGGCCATTCAAGGCGACAACG GTGAATACAATACAGTCGCAATCCGTGGTGTAGAAGGTAACACGGTATTCAATGTGGGTGGTGAGTTGTACTTCACTGAT GGTGAGGTTGTGAAAGACGCATCAGGTAACGTAGTCGGTAGTATTGAAGTTCGTAATAACGAATTGGTGTTTGTCAATGA CAAGGGTTTTGTTCACTTGAGTGTAGAGGATGGTCGACTAGTGGTGGAAGAAGTGAAGTTAAATCCTGTACACCCGATCG AACCAGCGCCAGAAAACCCAATTGAGCCTGTGCCAGAACATCCAATTGCAGGTGTTCCGTCAAACCCAATTGAGCCTGTG CCAGAGCATCCAATTGCAGGTGTTCCATCAAATCCAATCGAGCCTGTGCCAGAGCATCCAATTGCAGGTGTTCCATCAAA TCCAATCGAGCCGGTACCAGAGCATCCGATCGAAGGTGGGCCTGTACACCCAATCGAACGAACGCCAGAAAACCCAATTG AGCCAGTGCCTGAGCACCCGATTGCTGGTATCCCAACAAATCCAATTCAACCAGATGTTGAGAACCCTATAGAAGGTCCG GTAAACCTTCCTGCAAATGAATTAACCAAAGAACAGCGTGCAGAGCTGAAACAAAAAGTTCAGTCGCTGTCACAAGAGCA ACGTCAGCAAATTAAAAGAGCGATTCGCGACCGCGTTGAGCGTTCGTAA
Upstream 100 bases:
>100_bases TTCTTGATTTGGACCCACCAAACCTTTAAATCGCCGCCGCGTCTACAAACCAAGTCATTCTCGCTGAACCTAGCATCTCG AGGTTACTTGGGTATAAATC
Downstream 100 bases:
>100_bases ACCAATCGTATTAGGGTAAGTAGCAGGGAGTCGCTTGAATAAAGTGGCTCCTTTTTTGTTTTTATTTCTTATTAGGTTTT CTCATGAACAAGTCTTTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MKVKLLSAVIAASFLAGCSSSGSSDSPSEPAGVASVQTFEGEHFDGMAIQGDNGEYNTVAIRGVEGNTVFNVGGELYFTD GEVVKDASGNVVGSIEVRNNELVFVNDKGFVHLSVEDGRLVVEEVKLNPVHPIEPAPENPIEPVPEHPIAGVPSNPIEPV PEHPIAGVPSNPIEPVPEHPIAGVPSNPIEPVPEHPIEGGPVHPIERTPENPIEPVPEHPIAGIPTNPIQPDVENPIEGP VNLPANELTKEQRAELKQKVQSLSQEQRQQIKRAIRDRVERS
Sequences:
>Translated_282_residues MKVKLLSAVIAASFLAGCSSSGSSDSPSEPAGVASVQTFEGEHFDGMAIQGDNGEYNTVAIRGVEGNTVFNVGGELYFTD GEVVKDASGNVVGSIEVRNNELVFVNDKGFVHLSVEDGRLVVEEVKLNPVHPIEPAPENPIEPVPEHPIAGVPSNPIEPV PEHPIAGVPSNPIEPVPEHPIAGVPSNPIEPVPEHPIEGGPVHPIERTPENPIEPVPEHPIAGIPTNPIQPDVENPIEGP VNLPANELTKEQRAELKQKVQSLSQEQRQQIKRAIRDRVERS >Mature_282_residues MKVKLLSAVIAASFLAGCSSSGSSDSPSEPAGVASVQTFEGEHFDGMAIQGDNGEYNTVAIRGVEGNTVFNVGGELYFTD GEVVKDASGNVVGSIEVRNNELVFVNDKGFVHLSVEDGRLVVEEVKLNPVHPIEPAPENPIEPVPEHPIAGVPSNPIEPV PEHPIAGVPSNPIEPVPEHPIAGVPSNPIEPVPEHPIEGGPVHPIERTPENPIEPVPEHPIAGIPTNPIQPDVENPIEGP VNLPANELTKEQRAELKQKVQSLSQEQRQQIKRAIRDRVERS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30129; Mature: 30129
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVKLLSAVIAASFLAGCSSSGSSDSPSEPAGVASVQTFEGEHFDGMAIQGDNGEYNTVA CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCEEEEE IRGVEGNTVFNVGGELYFTDGEVVKDASGNVVGSIEVRNNELVFVNDKGFVHLSVEDGRL EEECCCCEEEEECCEEEECCCCEEECCCCCEEEEEEECCCEEEEECCCCEEEEEECCCEE VVEEVKLNPVHPIEPAPENPIEPVPEHPIAGVPSNPIEPVPEHPIAGVPSNPIEPVPEHP EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC IAGVPSNPIEPVPEHPIEGGPVHPIERTPENPIEPVPEHPIAGIPTNPIQPDVENPIEGP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VNLPANELTKEQRAELKQKVQSLSQEQRQQIKRAIRDRVERS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKVKLLSAVIAASFLAGCSSSGSSDSPSEPAGVASVQTFEGEHFDGMAIQGDNGEYNTVA CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCEEEEE IRGVEGNTVFNVGGELYFTDGEVVKDASGNVVGSIEVRNNELVFVNDKGFVHLSVEDGRL EEECCCCEEEEECCEEEECCCCEEECCCCCEEEEEEECCCEEEEECCCCEEEEEECCCEE VVEEVKLNPVHPIEPAPENPIEPVPEHPIAGVPSNPIEPVPEHPIAGVPSNPIEPVPEHP EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC IAGVPSNPIEPVPEHPIEGGPVHPIERTPENPIEPVPEHPIAGIPTNPIQPDVENPIEGP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VNLPANELTKEQRAELKQKVQSLSQEQRQQIKRAIRDRVERS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA