| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
Click here to switch to the map view.
The map label for this gene is 156976505
Identifier: 156976505
GI number: 156976505
Start: 521693
End: 521827
Strand: Direct
Name: 156976505
Synonym: VIBHAR_05278
Alternate gene names: NA
Gene position: 521693-521827 (Clockwise)
Preceding gene: 156976504
Following gene: 156976506
Centisome position: 23.67
GC content: 42.22
Gene sequence:
>135_bases TTGGCTTGTATACTTTGTTGTCGATTCTTGATTTGGACCCACCAAACCTTTAAATCGCCGCCGCGTCTACAAACCAAGTC ATTCTCGCTGAACCTAGCATCTCGAGGTTACTTGGGTATAAATCATGAAAGTTAA
Upstream 100 bases:
>100_bases TTCGAGGTCAAGGAAAACGACGCAGCGGAATAGCCAGCTCTTTCCAAGTTGTTTGACGCAGAAATCGGGTCAATGACACG CTCCCGAAGGGCGAGTTGAA
Downstream 100 bases:
>100_bases ATTACTGAGTGCAGTTATCGCAGCATCTTTTCTGGCAGGTTGTTCATCATCAGGTTCTTCGGACTCCCCTAGTGAGCCAG CAGGTGTGGCATCGGTGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 44; Mature: 43
Protein sequence:
>44_residues MACILCCRFLIWTHQTFKSPPRLQTKSFSLNLASRGYLGINHES
Sequences:
>Translated_44_residues MACILCCRFLIWTHQTFKSPPRLQTKSFSLNLASRGYLGINHES >Mature_43_residues ACILCCRFLIWTHQTFKSPPRLQTKSFSLNLASRGYLGINHES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5070; Mature: 4939
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 9.1 %Cys+Met (Translated Protein) 7.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACILCCRFLIWTHQTFKSPPRLQTKSFSLNLASRGYLGINHES CHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEECCCCC >Mature Secondary Structure ACILCCRFLIWTHQTFKSPPRLQTKSFSLNLASRGYLGINHES HHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA